Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rad54bQ6PFE3 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Gm14723-201ENSMUST00000118686 215 ntBASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Gm12196-201ENSMUST00000120954 262 ntBASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Olfml3-204ENSMUST00000169286 874 ntBASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rad54bQ6PFE3 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rad54bQ6PFE3 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rad54bQ6PFE3 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rad54bQ6PFE3 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rad54bQ6PFE3 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rad54bQ6PFE3 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rad54bQ6PFE3 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rad54bQ6PFE3 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rad54bQ6PFE3 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rad54bQ6PFE3 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rad54bQ6PFE3 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rad54bQ6PFE3 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rad54bQ6PFE3 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.47□□□□□ -0.57
Rad54bQ6PFE3 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rad54bQ6PFE3 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rad54bQ6PFE3 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rad54bQ6PFE3 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Rad54bQ6PFE3 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Rad54bQ6PFE3 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rad54bQ6PFE3 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rad54bQ6PFE3 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.47□□□□□ -0.57
Rad54bQ6PFE3 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.47□□□□□ -0.57
Rad54bQ6PFE3 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.47□□□□□ -0.57
Rad54bQ6PFE3 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rad54bQ6PFE3 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rad54bQ6PFE3 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rad54bQ6PFE3 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rad54bQ6PFE3 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.47□□□□□ -0.57
Rad54bQ6PFE3 Gm18734-201ENSMUST00000172937 808 ntBASIC11.47□□□□□ -0.57
Rad54bQ6PFE3 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rad54bQ6PFE3 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rad54bQ6PFE3 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Rad54bQ6PFE3 Gm27320-201ENSMUST00000184892 109 ntBASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms