Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm37058-201ENSMUST00000193393 1644 ntBASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nup98Q6PFD9 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Gm37782-201ENSMUST00000194879 678 ntBASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Olfr692-202ENSMUST00000217827 1126 ntBASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Prss23os-202ENSMUST00000179361 1362 ntBASIC13.22□□□□□ -0.29
Nup98Q6PFD9 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nup98Q6PFD9 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nup98Q6PFD9 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nup98Q6PFD9 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nup98Q6PFD9 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup98Q6PFD9 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup98Q6PFD9 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup98Q6PFD9 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Nup98Q6PFD9 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup98Q6PFD9 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC13.21□□□□□ -0.29
Nup98Q6PFD9 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Nup98Q6PFD9 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC13.21□□□□□ -0.29
Nup98Q6PFD9 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nup98Q6PFD9 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC13.21□□□□□ -0.29
Nup98Q6PFD9 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC13.21□□□□□ -0.29
Nup98Q6PFD9 Mir8091-201ENSMUST00000183602 139 ntBASIC13.21□□□□□ -0.29
Nup98Q6PFD9 Gm44498-201ENSMUST00000199509 111 ntBASIC13.21□□□□□ -0.29
Nup98Q6PFD9 Gm18010-201ENSMUST00000203553 202 ntBASIC13.21□□□□□ -0.29
Nup98Q6PFD9 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup98Q6PFD9 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup98Q6PFD9 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup98Q6PFD9 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nup98Q6PFD9 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC13.21□□□□□ -0.3
Nup98Q6PFD9 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nup98Q6PFD9 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nup98Q6PFD9 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Nup98Q6PFD9 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC13.21□□□□□ -0.3
Nup98Q6PFD9 Gm44663-201ENSMUST00000206898 3150 ntBASIC13.21□□□□□ -0.3
Nup98Q6PFD9 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Mir432-201ENSMUST00000157230 75 ntBASIC13.2□□□□□ -0.3
Nup98Q6PFD9 AC134793.1-202ENSMUST00000227444 803 ntBASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Gm21136-201ENSMUST00000186812 2575 ntBASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Gm6605-201ENSMUST00000031488 2574 ntBASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Gm45206-201ENSMUST00000206885 2285 ntBASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Gm5764-201ENSMUST00000118817 885 ntBASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC13.2□□□□□ -0.3
Nup98Q6PFD9 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms