Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Smarcd3Q6P9Z1 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Gm22323-201ENSMUST00000103832 109 ntBASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Gm11509-201ENSMUST00000117358 325 ntBASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Gm13350-201ENSMUST00000120519 479 ntBASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Gm7584-201ENSMUST00000175829 940 ntBASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Gm29615-201ENSMUST00000185371 697 ntBASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Gm28224-201ENSMUST00000186078 697 ntBASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Gm29001-201ENSMUST00000186177 697 ntBASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Gm28292-201ENSMUST00000186593 697 ntBASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Gm28101-201ENSMUST00000187608 697 ntBASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Gm29076-201ENSMUST00000187689 697 ntBASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Gm28302-201ENSMUST00000187931 697 ntBASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Gm28646-201ENSMUST00000188220 697 ntBASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Gm28205-201ENSMUST00000189177 697 ntBASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Gm29032-201ENSMUST00000189797 697 ntBASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Gm28695-201ENSMUST00000190300 697 ntBASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Gm37448-201ENSMUST00000192795 697 ntBASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Gm37259-201ENSMUST00000193903 849 ntBASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Gm6439-201ENSMUST00000199849 862 ntBASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smarcd3Q6P9Z1 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms