Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
ParpbpQ6IRT3 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
ParpbpQ6IRT3 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
ParpbpQ6IRT3 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
ParpbpQ6IRT3 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
ParpbpQ6IRT3 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
ParpbpQ6IRT3 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
ParpbpQ6IRT3 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
ParpbpQ6IRT3 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
ParpbpQ6IRT3 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
ParpbpQ6IRT3 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
ParpbpQ6IRT3 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
ParpbpQ6IRT3 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
ParpbpQ6IRT3 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC10.74□□□□□ -0.69
ParpbpQ6IRT3 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
ParpbpQ6IRT3 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
ParpbpQ6IRT3 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
ParpbpQ6IRT3 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
ParpbpQ6IRT3 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
ParpbpQ6IRT3 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
ParpbpQ6IRT3 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
ParpbpQ6IRT3 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
ParpbpQ6IRT3 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
ParpbpQ6IRT3 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Gm12579-201ENSMUST00000118040 783 ntBASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Gm12566-201ENSMUST00000121479 359 ntBASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Gm25116-201ENSMUST00000157191 122 ntBASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Mir8093-201ENSMUST00000185043 137 ntBASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Gm9785-201ENSMUST00000062642 1006 ntBASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
ParpbpQ6IRT3 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
ParpbpQ6IRT3 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
ParpbpQ6IRT3 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.72□□□□□ -0.69
ParpbpQ6IRT3 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
ParpbpQ6IRT3 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
ParpbpQ6IRT3 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
ParpbpQ6IRT3 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
ParpbpQ6IRT3 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
ParpbpQ6IRT3 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
ParpbpQ6IRT3 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
ParpbpQ6IRT3 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
ParpbpQ6IRT3 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
ParpbpQ6IRT3 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
ParpbpQ6IRT3 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.72□□□□□ -0.69
ParpbpQ6IRT3 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC10.72□□□□□ -0.69
ParpbpQ6IRT3 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
ParpbpQ6IRT3 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
ParpbpQ6IRT3 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
ParpbpQ6IRT3 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.72□□□□□ -0.69
ParpbpQ6IRT3 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
ParpbpQ6IRT3 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
ParpbpQ6IRT3 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
ParpbpQ6IRT3 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
ParpbpQ6IRT3 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms