Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt39Q6IFX4 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Krt39Q6IFX4 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.58□□□□□ -0.39
Krt39Q6IFX4 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Krt39Q6IFX4 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Krt39Q6IFX4 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Gm29615-201ENSMUST00000185371 697 ntBASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Gm28224-201ENSMUST00000186078 697 ntBASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Gm29001-201ENSMUST00000186177 697 ntBASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Gm28292-201ENSMUST00000186593 697 ntBASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Gm28101-201ENSMUST00000187608 697 ntBASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Gm29076-201ENSMUST00000187689 697 ntBASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Gm28302-201ENSMUST00000187931 697 ntBASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Gm28646-201ENSMUST00000188220 697 ntBASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Gm28205-201ENSMUST00000189177 697 ntBASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Gm29032-201ENSMUST00000189797 697 ntBASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Gm28695-201ENSMUST00000190300 697 ntBASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Gm37448-201ENSMUST00000192795 697 ntBASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Krt39Q6IFX4 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Gm26660-202ENSMUST00000223620 4112 ntBASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Gm37954-201ENSMUST00000195400 2071 ntBASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Gm29199-201ENSMUST00000187766 775 ntBASIC12.57□□□□□ -0.4
Krt39Q6IFX4 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms