Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Gm11956-201ENSMUST00000119525 512 ntBASIC12.24□□□□□ -0.45
Scube3Q66PY1 Gm13924-201ENSMUST00000119899 486 ntBASIC12.24□□□□□ -0.45
Scube3Q66PY1 Gm14417-201ENSMUST00000120036 1074 ntBASIC12.24□□□□□ -0.45
Scube3Q66PY1 Gm14603-201ENSMUST00000121275 448 ntBASIC12.24□□□□□ -0.45
Scube3Q66PY1 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Gm7666-201ENSMUST00000146631 819 ntBASIC12.24□□□□□ -0.45
Scube3Q66PY1 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Gm6182-201ENSMUST00000156439 1208 ntBASIC12.24□□□□□ -0.45
Scube3Q66PY1 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.24□□□□□ -0.45
Scube3Q66PY1 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scube3Q66PY1 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.24□□□□□ -0.45
Scube3Q66PY1 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scube3Q66PY1 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Gm9540-201ENSMUST00000188230 478 ntBASIC12.24□□□□□ -0.45
Scube3Q66PY1 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Gm29516-201ENSMUST00000190402 468 ntBASIC12.24□□□□□ -0.45
Scube3Q66PY1 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Mir7686-201ENSMUST00000200604 57 ntBASIC12.24□□□□□ -0.45
Scube3Q66PY1 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scube3Q66PY1 AC153801.1-201ENSMUST00000217904 947 ntBASIC12.24□□□□□ -0.45
Scube3Q66PY1 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.24□□□□□ -0.45
Scube3Q66PY1 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.24□□□□□ -0.45
Scube3Q66PY1 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.24□□□□□ -0.45
Scube3Q66PY1 Tmem212-201ENSMUST00000058077 716 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scube3Q66PY1 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scube3Q66PY1 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scube3Q66PY1 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scube3Q66PY1 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scube3Q66PY1 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scube3Q66PY1 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scube3Q66PY1 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.23□□□□□ -0.45
Scube3Q66PY1 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Scube3Q66PY1 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scube3Q66PY1 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scube3Q66PY1 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Scube3Q66PY1 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scube3Q66PY1 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scube3Q66PY1 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scube3Q66PY1 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scube3Q66PY1 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.23□□□□□ -0.45
Scube3Q66PY1 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Scube3Q66PY1 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scube3Q66PY1 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Scube3Q66PY1 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scube3Q66PY1 Gm22920-201ENSMUST00000102175 109 ntBASIC12.23□□□□□ -0.45
Scube3Q66PY1 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scube3Q66PY1 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Scube3Q66PY1 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scube3Q66PY1 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.23□□□□□ -0.45
Scube3Q66PY1 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.23□□□□□ -0.45
Scube3Q66PY1 Gm22985-201ENSMUST00000122754 116 ntBASIC12.23□□□□□ -0.45
Scube3Q66PY1 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC12.23□□□□□ -0.45
Scube3Q66PY1 Gm22144-201ENSMUST00000157402 102 ntBASIC12.23□□□□□ -0.45
Scube3Q66PY1 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
Scube3Q66PY1 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.23□□□□□ -0.45
Scube3Q66PY1 Gm10807-201ENSMUST00000177134 795 ntBASIC12.23□□□□□ -0.45
Scube3Q66PY1 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scube3Q66PY1 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Scube3Q66PY1 Gm37452-201ENSMUST00000194416 1160 ntBASIC12.23□□□□□ -0.45
Scube3Q66PY1 Gm42836-201ENSMUST00000197198 728 ntTSL 5 BASIC12.23□□□□□ -0.45
Scube3Q66PY1 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC12.23□□□□□ -0.45
Scube3Q66PY1 Gm42588-201ENSMUST00000200538 1297 ntBASIC12.23□□□□□ -0.45
Scube3Q66PY1 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.23□□□□□ -0.45
Scube3Q66PY1 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 170.6 ms