Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
AtmQ62388 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
AtmQ62388 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
AtmQ62388 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
AtmQ62388 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
AtmQ62388 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
AtmQ62388 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
AtmQ62388 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
AtmQ62388 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
AtmQ62388 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
AtmQ62388 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
AtmQ62388 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
AtmQ62388 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
AtmQ62388 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.48□□□□□ -0.73
AtmQ62388 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.48□□□□□ -0.73
AtmQ62388 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
AtmQ62388 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.48□□□□□ -0.73
AtmQ62388 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
AtmQ62388 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
AtmQ62388 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
AtmQ62388 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
AtmQ62388 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
AtmQ62388 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC10.48□□□□□ -0.73
AtmQ62388 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
AtmQ62388 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC10.48□□□□□ -0.73
AtmQ62388 Gm16480-201ENSMUST00000120439 832 ntBASIC10.48□□□□□ -0.73
AtmQ62388 Plxna4os3-201ENSMUST00000127668 269 ntTSL 3 BASIC10.48□□□□□ -0.73
AtmQ62388 Gm15664-201ENSMUST00000160167 184 ntBASIC10.48□□□□□ -0.73
AtmQ62388 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
AtmQ62388 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
AtmQ62388 Gm9409-201ENSMUST00000197017 316 ntBASIC10.48□□□□□ -0.73
AtmQ62388 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
AtmQ62388 Gm18065-201ENSMUST00000221395 526 ntBASIC10.48□□□□□ -0.73
AtmQ62388 AC153153.1-201ENSMUST00000225803 793 ntBASIC10.48□□□□□ -0.73
AtmQ62388 AC159002.1-201ENSMUST00000226714 924 ntBASIC10.48□□□□□ -0.73
AtmQ62388 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC10.48□□□□□ -0.73
AtmQ62388 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
AtmQ62388 Gm16477-201ENSMUST00000085365 801 ntBASIC10.48□□□□□ -0.73
AtmQ62388 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
AtmQ62388 Gm17415-201ENSMUST00000096427 789 ntBASIC10.48□□□□□ -0.73
AtmQ62388 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
AtmQ62388 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.48□□□□□ -0.73
AtmQ62388 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
AtmQ62388 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
AtmQ62388 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
AtmQ62388 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
AtmQ62388 AC117194.1-201ENSMUST00000224847 3002 ntBASIC10.48□□□□□ -0.73
AtmQ62388 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
AtmQ62388 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
AtmQ62388 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
AtmQ62388 Gm11629-201ENSMUST00000123784 384 ntTSL 3 BASIC10.48□□□□□ -0.73
AtmQ62388 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC10.48□□□□□ -0.73
AtmQ62388 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
AtmQ62388 Gm37597-201ENSMUST00000191853 382 ntBASIC10.48□□□□□ -0.73
AtmQ62388 Gm44498-201ENSMUST00000199509 111 ntBASIC10.48□□□□□ -0.73
AtmQ62388 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
AtmQ62388 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
AtmQ62388 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
AtmQ62388 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
AtmQ62388 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.48□□□□□ -0.73
AtmQ62388 Gm29101-201ENSMUST00000188329 1471 ntBASIC10.48□□□□□ -0.73
AtmQ62388 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
AtmQ62388 Gm42974-201ENSMUST00000199556 2654 ntBASIC10.48□□□□□ -0.73
AtmQ62388 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC10.48□□□□□ -0.73
AtmQ62388 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
AtmQ62388 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC10.48□□□□□ -0.73
AtmQ62388 Cog3-203ENSMUST00000227473 4197 ntBASIC10.48□□□□□ -0.73
AtmQ62388 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
AtmQ62388 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
AtmQ62388 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
AtmQ62388 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
AtmQ62388 Rgs8-205ENSMUST00000111815 765 ntTSL 5 BASIC10.47□□□□□ -0.73
AtmQ62388 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC10.47□□□□□ -0.73
AtmQ62388 Gm12463-201ENSMUST00000118271 849 ntBASIC10.47□□□□□ -0.73
AtmQ62388 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC10.47□□□□□ -0.73
AtmQ62388 Gm16288-201ENSMUST00000137940 367 ntBASIC10.47□□□□□ -0.73
AtmQ62388 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
AtmQ62388 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC10.47□□□□□ -0.73
AtmQ62388 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
AtmQ62388 Gm44420-201ENSMUST00000203669 490 ntBASIC10.47□□□□□ -0.73
AtmQ62388 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
AtmQ62388 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
AtmQ62388 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
AtmQ62388 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
AtmQ62388 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
AtmQ62388 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
AtmQ62388 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
AtmQ62388 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
AtmQ62388 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
AtmQ62388 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
AtmQ62388 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
AtmQ62388 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
AtmQ62388 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC10.47□□□□□ -0.73
AtmQ62388 Gm14227-201ENSMUST00000119431 629 ntBASIC10.47□□□□□ -0.73
AtmQ62388 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.47□□□□□ -0.73
AtmQ62388 Gm23555-201ENSMUST00000157815 135 ntBASIC10.47□□□□□ -0.73
AtmQ62388 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
AtmQ62388 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
AtmQ62388 Gm8707-201ENSMUST00000183325 980 ntBASIC10.47□□□□□ -0.73
AtmQ62388 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms