Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Foxd4Q60688 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Foxd4Q60688 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Foxd4Q60688 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Foxd4Q60688 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxd4Q60688 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.29□□□□□ -0.44
Foxd4Q60688 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.29□□□□□ -0.44
Foxd4Q60688 Gm6621-201ENSMUST00000193251 772 ntBASIC12.29□□□□□ -0.44
Foxd4Q60688 Gm45800-201ENSMUST00000210331 700 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Foxd4Q60688 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.29□□□□□ -0.44
Foxd4Q60688 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Foxd4Q60688 AC161426.1-201ENSMUST00000214137 286 ntBASIC12.29□□□□□ -0.44
Foxd4Q60688 AC123835.1-201ENSMUST00000214362 670 ntBASIC12.29□□□□□ -0.44
Foxd4Q60688 AC158631.2-201ENSMUST00000219999 478 ntBASIC12.29□□□□□ -0.44
Foxd4Q60688 Gm5655-201ENSMUST00000221078 901 ntBASIC12.29□□□□□ -0.44
Foxd4Q60688 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxd4Q60688 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Foxd4Q60688 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxd4Q60688 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.29□□□□□ -0.44
Foxd4Q60688 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxd4Q60688 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxd4Q60688 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxd4Q60688 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.29□□□□□ -0.44
Foxd4Q60688 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Foxd4Q60688 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxd4Q60688 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Foxd4Q60688 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Foxd4Q60688 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.29□□□□□ -0.44
Foxd4Q60688 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxd4Q60688 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxd4Q60688 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Foxd4Q60688 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxd4Q60688 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxd4Q60688 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.28□□□□□ -0.44
Foxd4Q60688 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxd4Q60688 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Foxd4Q60688 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Foxd4Q60688 Trbv2-201ENSMUST00000103263 560 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Foxd4Q60688 Gm24255-201ENSMUST00000104481 128 ntBASIC12.28□□□□□ -0.44
Foxd4Q60688 Gm12697-201ENSMUST00000118008 667 ntBASIC12.28□□□□□ -0.44
Foxd4Q60688 Gm13736-201ENSMUST00000119272 253 ntBASIC12.28□□□□□ -0.44
Foxd4Q60688 Gm14713-201ENSMUST00000122362 686 ntBASIC12.28□□□□□ -0.44
Foxd4Q60688 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Foxd4Q60688 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Foxd4Q60688 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxd4Q60688 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC12.28□□□□□ -0.44
Foxd4Q60688 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Foxd4Q60688 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.28□□□□□ -0.44
Foxd4Q60688 Gm29611-201ENSMUST00000186132 1011 ntTSL 5 BASIC12.28□□□□□ -0.44
Foxd4Q60688 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Foxd4Q60688 Gm18304-201ENSMUST00000189162 546 ntBASIC12.28□□□□□ -0.44
Foxd4Q60688 Gm7891-201ENSMUST00000190284 843 ntBASIC12.28□□□□□ -0.44
Foxd4Q60688 Gm44656-201ENSMUST00000208428 490 ntBASIC12.28□□□□□ -0.44
Foxd4Q60688 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.28□□□□□ -0.44
Foxd4Q60688 Gm18255-201ENSMUST00000211316 765 ntBASIC12.28□□□□□ -0.44
Foxd4Q60688 Gm45379-201ENSMUST00000211772 549 ntBASIC12.28□□□□□ -0.44
Foxd4Q60688 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxd4Q60688 AC123735.1-201ENSMUST00000227358 605 ntBASIC12.28□□□□□ -0.44
Foxd4Q60688 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxd4Q60688 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxd4Q60688 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.28□□□□□ -0.44
Foxd4Q60688 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.28□□□□□ -0.44
Foxd4Q60688 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.28□□□□□ -0.44
Foxd4Q60688 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxd4Q60688 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.28□□□□□ -0.44
Foxd4Q60688 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.28□□□□□ -0.44
Foxd4Q60688 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.28□□□□□ -0.44
Foxd4Q60688 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Foxd4Q60688 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Foxd4Q60688 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Foxd4Q60688 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.28□□□□□ -0.44
Foxd4Q60688 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Foxd4Q60688 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Foxd4Q60688 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Foxd4Q60688 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.27□□□□□ -0.44
Foxd4Q60688 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Foxd4Q60688 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Foxd4Q60688 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Foxd4Q60688 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Foxd4Q60688 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Foxd4Q60688 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Foxd4Q60688 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Foxd4Q60688 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.27□□□□□ -0.45
Foxd4Q60688 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Foxd4Q60688 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Foxd4Q60688 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Foxd4Q60688 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.27□□□□□ -0.45
Foxd4Q60688 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.45
Foxd4Q60688 Gm14550-201ENSMUST00000117918 407 ntBASIC12.27□□□□□ -0.45
Foxd4Q60688 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.27□□□□□ -0.45
Foxd4Q60688 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Foxd4Q60688 Gm17376-201ENSMUST00000166016 84 ntBASIC12.27□□□□□ -0.45
Foxd4Q60688 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Foxd4Q60688 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Foxd4Q60688 Gm27025-201ENSMUST00000182392 942 ntBASIC12.27□□□□□ -0.45
Foxd4Q60688 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC12.27□□□□□ -0.45
Foxd4Q60688 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Foxd4Q60688 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.27□□□□□ -0.45
Foxd4Q60688 Gm20586-201ENSMUST00000210122 547 ntBASIC12.27□□□□□ -0.45
Foxd4Q60688 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms