Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Gm18561-201ENSMUST00000206027 804 ntBASIC13.65□□□□□ -0.22
Vps54Q5SPW0 AC114645.1-201ENSMUST00000215831 187 ntBASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Vps54Q5SPW0 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Vps54Q5SPW0 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps54Q5SPW0 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Gm25766-201ENSMUST00000104101 131 ntBASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Snord17-201ENSMUST00000104526 238 ntBASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Gm14665-201ENSMUST00000122294 557 ntBASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Gm19015-201ENSMUST00000184002 1189 ntBASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Gm8531-201ENSMUST00000188319 893 ntBASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC13.64□□□□□ -0.23
Vps54Q5SPW0 AC124433.1-201ENSMUST00000224483 1063 ntBASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Rubie-203ENSMUST00000227803 2430 ntBASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps54Q5SPW0 AC155245.1-201ENSMUST00000222266 1804 ntBASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Gm37969-201ENSMUST00000195777 3409 ntBASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps54Q5SPW0 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Gm44323-201ENSMUST00000198689 129 ntBASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps54Q5SPW0 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms