Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Gm14058-201ENSMUST00000116082 735 ntBASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Gm13035-201ENSMUST00000117496 342 ntBASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 CT009713.8-202ENSMUST00000224732 385 ntBASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Gm37600-201ENSMUST00000193764 3292 ntBASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav5d-4Q5R1F6 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav5d-4Q5R1F6 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav5d-4Q5R1F6 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav5d-4Q5R1F6 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC9.77□□□□□ -0.84
Trav5d-4Q5R1F6 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC9.77□□□□□ -0.84
Trav5d-4Q5R1F6 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav5d-4Q5R1F6 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav5d-4Q5R1F6 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
Trav5d-4Q5R1F6 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC9.77□□□□□ -0.84
Trav5d-4Q5R1F6 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav5d-4Q5R1F6 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Trav5d-4Q5R1F6 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 Gm12997-201ENSMUST00000120207 640 ntBASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 Gm15566-201ENSMUST00000121130 590 ntBASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 Gm11450-201ENSMUST00000121144 333 ntBASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 Gm6108-201ENSMUST00000208365 367 ntBASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 Gm6653-201ENSMUST00000218063 1288 ntBASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Trav5d-4Q5R1F6 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms