Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Gm11675-201ENSMUST00000121873 832 ntBASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Gm45592-201ENSMUST00000209605 1043 ntBASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Gm44755-201ENSMUST00000207830 2102 ntBASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.22□□□□□ -0.29
Rc3h1Q4VGL6 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Gm13333-201ENSMUST00000119424 781 ntBASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Gm16397-201ENSMUST00000122201 494 ntBASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Gm17709-201ENSMUST00000174536 1096 ntBASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Gm21147-201ENSMUST00000186046 913 ntBASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Gm28975-201ENSMUST00000186412 686 ntBASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Gm44323-201ENSMUST00000198689 129 ntBASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Gm5599-201ENSMUST00000209602 788 ntBASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Gm8436-201ENSMUST00000210152 1080 ntBASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Gm5749-201ENSMUST00000210673 1090 ntBASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Gm45758-201ENSMUST00000212448 1006 ntBASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Gm4811-201ENSMUST00000220879 1220 ntBASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 n-R5s185-201ENSMUST00000083953 119 ntBASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC13.21□□□□□ -0.29
Rc3h1Q4VGL6 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rc3h1Q4VGL6 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rc3h1Q4VGL6 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rc3h1Q4VGL6 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rc3h1Q4VGL6 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Rc3h1Q4VGL6 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
Rc3h1Q4VGL6 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rc3h1Q4VGL6 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Rc3h1Q4VGL6 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Gm21759-201ENSMUST00000178345 1828 ntBASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Gm15617-201ENSMUST00000118973 771 ntBASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Gm12990-201ENSMUST00000120372 468 ntBASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Gm29155-201ENSMUST00000185910 269 ntBASIC13.2□□□□□ -0.3
Rc3h1Q4VGL6 Gm30946-201ENSMUST00000198288 724 ntBASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms