Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Gm28047Q3US59 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gm28047Q3US59 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gm28047Q3US59 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gm28047Q3US59 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gm28047Q3US59 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.95□□□□□ -0.34
Gm28047Q3US59 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28047Q3US59 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Gm28047Q3US59 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28047Q3US59 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28047Q3US59 AC155245.1-201ENSMUST00000222266 1804 ntBASIC12.95□□□□□ -0.34
Gm28047Q3US59 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Gm28047Q3US59 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28047Q3US59 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.95□□□□□ -0.34
Gm28047Q3US59 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Gm28047Q3US59 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28047Q3US59 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28047Q3US59 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28047Q3US59 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28047Q3US59 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28047Q3US59 Gm25148-201ENSMUST00000104611 123 ntBASIC12.95□□□□□ -0.34
Gm28047Q3US59 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28047Q3US59 Gm14028-201ENSMUST00000117434 479 ntBASIC12.95□□□□□ -0.34
Gm28047Q3US59 Gm13809-201ENSMUST00000117921 597 ntBASIC12.95□□□□□ -0.34
Gm28047Q3US59 Gm14277-201ENSMUST00000121195 360 ntBASIC12.95□□□□□ -0.34
Gm28047Q3US59 Gm15329-201ENSMUST00000121408 155 ntBASIC12.95□□□□□ -0.34
Gm28047Q3US59 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.95□□□□□ -0.34
Gm28047Q3US59 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC12.95□□□□□ -0.34
Gm28047Q3US59 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.95□□□□□ -0.34
Gm28047Q3US59 Gm2383-201ENSMUST00000181461 807 ntBASIC12.95□□□□□ -0.34
Gm28047Q3US59 Uba52-ps-201ENSMUST00000183770 379 ntBASIC12.95□□□□□ -0.34
Gm28047Q3US59 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Gm28047Q3US59 Gm7504-201ENSMUST00000201449 424 ntBASIC12.95□□□□□ -0.34
Gm28047Q3US59 Gm18539-201ENSMUST00000204745 1090 ntBASIC12.95□□□□□ -0.34
Gm28047Q3US59 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.95□□□□□ -0.34
Gm28047Q3US59 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28047Q3US59 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28047Q3US59 Gm25007-201ENSMUST00000083808 133 ntBASIC12.95□□□□□ -0.34
Gm28047Q3US59 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28047Q3US59 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28047Q3US59 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.95□□□□□ -0.34
Gm28047Q3US59 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.95□□□□□ -0.34
Gm28047Q3US59 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Gm28047Q3US59 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28047Q3US59 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28047Q3US59 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Gm28047Q3US59 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28047Q3US59 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28047Q3US59 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gm28047Q3US59 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.95□□□□□ -0.34
Gm28047Q3US59 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Gm44415-201ENSMUST00000204151 2112 ntBASIC12.94□□□□□ -0.34
Gm28047Q3US59 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.94□□□□□ -0.34
Gm28047Q3US59 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Gm23200-201ENSMUST00000104379 132 ntBASIC12.94□□□□□ -0.34
Gm28047Q3US59 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.94□□□□□ -0.34
Gm28047Q3US59 Gm15549-201ENSMUST00000121595 622 ntBASIC12.94□□□□□ -0.34
Gm28047Q3US59 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Gm27341-201ENSMUST00000183570 106 ntBASIC12.94□□□□□ -0.34
Gm28047Q3US59 Gm28450-201ENSMUST00000187349 638 ntBASIC12.94□□□□□ -0.34
Gm28047Q3US59 Gm44506-201ENSMUST00000206278 965 ntBASIC12.94□□□□□ -0.34
Gm28047Q3US59 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Gm5369-201ENSMUST00000217499 588 ntBASIC12.94□□□□□ -0.34
Gm28047Q3US59 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Gm28047Q3US59 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gm28047Q3US59 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms