Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Gm13937-201ENSMUST00000121000 988 ntBASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Gm45758-201ENSMUST00000212448 1006 ntBASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Gm3028-201ENSMUST00000213805 1119 ntBASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Gm10263-201ENSMUST00000085163 300 ntBASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Gm43365-201ENSMUST00000196522 2106 ntBASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ssbp4Q3U4B1 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Gm13722-201ENSMUST00000117964 3066 ntBASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Gm25063-201ENSMUST00000104666 94 ntBASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Gm8111-201ENSMUST00000117659 987 ntBASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Gm8302-201ENSMUST00000119217 852 ntBASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Gm25492-201ENSMUST00000157383 129 ntBASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Gm37028-201ENSMUST00000194276 107 ntBASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Gm42816-201ENSMUST00000198433 325 ntBASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Gm18561-201ENSMUST00000206027 804 ntBASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Gm8436-201ENSMUST00000210152 1080 ntBASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Gm5749-201ENSMUST00000210673 1090 ntBASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 AC114645.1-201ENSMUST00000215831 187 ntBASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 CT010506.1-201ENSMUST00000223673 349 ntBASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 CT009527.1-201ENSMUST00000224205 339 ntBASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Gm44086-201ENSMUST00000203251 2349 ntBASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ssbp4Q3U4B1 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms