Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ccbe1Q3MI99 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccbe1Q3MI99 Gm10478-201ENSMUST00000084451 396 ntBASIC10.35□□□□□ -0.75
Ccbe1Q3MI99 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ccbe1Q3MI99 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.35□□□□□ -0.75
Ccbe1Q3MI99 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccbe1Q3MI99 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccbe1Q3MI99 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccbe1Q3MI99 Bpifb9a-201ENSMUST00000088924 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccbe1Q3MI99 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccbe1Q3MI99 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccbe1Q3MI99 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ccbe1Q3MI99 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ccbe1Q3MI99 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccbe1Q3MI99 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccbe1Q3MI99 Cd300lg-203ENSMUST00000107164 2737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ccbe1Q3MI99 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Zfp942-202ENSMUST00000091879 3265 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Gm232-201ENSMUST00000216549 2559 ntBASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Rpp14-201ENSMUST00000023924 2401 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Gm16479-201ENSMUST00000121706 932 ntBASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Gm15429-201ENSMUST00000151268 798 ntBASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Gm6152-201ENSMUST00000151704 340 ntBASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Gm27572-201ENSMUST00000183702 255 ntBASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Gm27731-201ENSMUST00000185192 107 ntBASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Gm37597-201ENSMUST00000191853 382 ntBASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Gm38230-201ENSMUST00000193572 1159 ntBASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Gm6091-201ENSMUST00000098307 165 ntBASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 AA474408-201ENSMUST00000098110 3339 ntBASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Gm38245-201ENSMUST00000191702 2621 ntBASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Gm39459-201ENSMUST00000215662 1895 ntTSL 5 BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ccbe1Q3MI99 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.33□□□□□ -0.76
Ccbe1Q3MI99 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ccbe1Q3MI99 Gm43820-201ENSMUST00000199414 3346 ntBASIC10.33□□□□□ -0.76
Ccbe1Q3MI99 Gm43307-201ENSMUST00000199465 2371 ntBASIC10.33□□□□□ -0.76
Ccbe1Q3MI99 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccbe1Q3MI99 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Ccbe1Q3MI99 Gm38357-201ENSMUST00000195382 2464 ntBASIC10.33□□□□□ -0.76
Ccbe1Q3MI99 Gm19409-201ENSMUST00000198244 2858 ntBASIC10.33□□□□□ -0.76
Ccbe1Q3MI99 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.33□□□□□ -0.76
Ccbe1Q3MI99 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Ccbe1Q3MI99 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ccbe1Q3MI99 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccbe1Q3MI99 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC10.33□□□□□ -0.76
Ccbe1Q3MI99 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccbe1Q3MI99 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccbe1Q3MI99 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC10.33□□□□□ -0.76
Ccbe1Q3MI99 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ccbe1Q3MI99 Gm14660-201ENSMUST00000119809 575 ntBASIC10.33□□□□□ -0.76
Ccbe1Q3MI99 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Ccbe1Q3MI99 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.33□□□□□ -0.76
Ccbe1Q3MI99 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.33□□□□□ -0.76
Ccbe1Q3MI99 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms