Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Gm4857-201ENSMUST00000192718 785 ntBASIC11.48□□□□□ -0.57
Pfdn6Q03958 Gm38151-201ENSMUST00000195085 289 ntBASIC11.48□□□□□ -0.57
Pfdn6Q03958 Gm7003-201ENSMUST00000195089 312 ntBASIC11.48□□□□□ -0.57
Pfdn6Q03958 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Gm6905-201ENSMUST00000205729 511 ntBASIC11.48□□□□□ -0.57
Pfdn6Q03958 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.48□□□□□ -0.57
Pfdn6Q03958 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn6Q03958 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pfdn6Q03958 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn6Q03958 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.47□□□□□ -0.57
Pfdn6Q03958 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn6Q03958 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Gm14071-201ENSMUST00000117817 509 ntBASIC11.47□□□□□ -0.57
Pfdn6Q03958 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.47□□□□□ -0.57
Pfdn6Q03958 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Gm2383-201ENSMUST00000181461 807 ntBASIC11.47□□□□□ -0.57
Pfdn6Q03958 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Gm44008-201ENSMUST00000204345 412 ntBASIC11.47□□□□□ -0.57
Pfdn6Q03958 Gm45186-201ENSMUST00000206874 478 ntBASIC11.47□□□□□ -0.57
Pfdn6Q03958 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Mir433-201ENSMUST00000093564 124 ntBASIC11.47□□□□□ -0.57
Pfdn6Q03958 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn6Q03958 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Pfdn6Q03958 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pfdn6Q03958 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.57
Pfdn6Q03958 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pfdn6Q03958 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pfdn6Q03958 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Pfdn6Q03958 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pfdn6Q03958 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pfdn6Q03958 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pfdn6Q03958 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pfdn6Q03958 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.46□□□□□ -0.57
Pfdn6Q03958 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.46□□□□□ -0.57
Pfdn6Q03958 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pfdn6Q03958 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pfdn6Q03958 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pfdn6Q03958 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
Pfdn6Q03958 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.46□□□□□ -0.57
Pfdn6Q03958 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.46□□□□□ -0.57
Pfdn6Q03958 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Pfdn6Q03958 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.46□□□□□ -0.57
Pfdn6Q03958 Gm18734-201ENSMUST00000172937 808 ntBASIC11.46□□□□□ -0.57
Pfdn6Q03958 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pfdn6Q03958 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Pfdn6Q03958 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.46□□□□□ -0.57
Pfdn6Q03958 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.46□□□□□ -0.57
Pfdn6Q03958 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.46□□□□□ -0.57
Pfdn6Q03958 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pfdn6Q03958 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pfdn6Q03958 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Pfdn6Q03958 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pfdn6Q03958 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Pfdn6Q03958 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
Pfdn6Q03958 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Pfdn6Q03958 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Pfdn6Q03958 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Pfdn6Q03958 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms