Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a1Q00780 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a1Q00780 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC9.79□□□□□ -0.84
Col8a1Q00780 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a1Q00780 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC9.79□□□□□ -0.84
Col8a1Q00780 Zkscan3-207ENSMUST00000223831 2101 ntBASIC9.79□□□□□ -0.84
Col8a1Q00780 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a1Q00780 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Col8a1Q00780 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a1Q00780 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a1Q00780 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Col8a1Q00780 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a1Q00780 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a1Q00780 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Col8a1Q00780 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a1Q00780 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC9.79□□□□□ -0.84
Col8a1Q00780 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a1Q00780 Gm12194-201ENSMUST00000117756 1012 ntBASIC9.79□□□□□ -0.84
Col8a1Q00780 Gm14497-201ENSMUST00000119537 580 ntBASIC9.79□□□□□ -0.84
Col8a1Q00780 Gm15982-201ENSMUST00000121681 554 ntBASIC9.79□□□□□ -0.84
Col8a1Q00780 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a1Q00780 Gm4462-201ENSMUST00000166453 492 ntBASIC9.79□□□□□ -0.84
Col8a1Q00780 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC9.79□□□□□ -0.84
Col8a1Q00780 Gm24809-201ENSMUST00000175318 271 ntBASIC9.79□□□□□ -0.84
Col8a1Q00780 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a1Q00780 Mir6953-201ENSMUST00000184745 68 ntBASIC9.79□□□□□ -0.84
Col8a1Q00780 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Col8a1Q00780 Gm17796-201ENSMUST00000189015 1213 ntBASIC9.79□□□□□ -0.84
Col8a1Q00780 Gm37319-201ENSMUST00000193500 636 ntBASIC9.79□□□□□ -0.84
Col8a1Q00780 Gm34379-201ENSMUST00000195036 290 ntBASIC9.79□□□□□ -0.84
Col8a1Q00780 Gm43249-201ENSMUST00000200464 458 ntBASIC9.79□□□□□ -0.84
Col8a1Q00780 Gm6450-201ENSMUST00000200896 574 ntBASIC9.79□□□□□ -0.84
Col8a1Q00780 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a1Q00780 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a1Q00780 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC9.79□□□□□ -0.84
Col8a1Q00780 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a1Q00780 Gm26670-202ENSMUST00000226862 340 ntBASIC9.79□□□□□ -0.84
Col8a1Q00780 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Col8a1Q00780 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC9.79□□□□□ -0.84
Col8a1Q00780 Gm26035-201ENSMUST00000083065 308 ntBASIC9.79□□□□□ -0.84
Col8a1Q00780 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a1Q00780 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Col8a1Q00780 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a1Q00780 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Col8a1Q00780 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a1Q00780 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a1Q00780 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a1Q00780 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a1Q00780 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC9.79□□□□□ -0.84
Col8a1Q00780 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC9.79□□□□□ -0.84
Col8a1Q00780 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a1Q00780 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a1Q00780 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
Col8a1Q00780 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a1Q00780 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a1Q00780 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Col8a1Q00780 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC9.79□□□□□ -0.84
Col8a1Q00780 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a1Q00780 Gm44292-201ENSMUST00000205194 2364 ntBASIC9.79□□□□□ -0.84
Col8a1Q00780 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a1Q00780 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC9.79□□□□□ -0.84
Col8a1Q00780 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a1Q00780 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a1Q00780 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Col8a1Q00780 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a1Q00780 Ptprm-203ENSMUST00000224091 3773 ntBASIC9.78□□□□□ -0.84
Col8a1Q00780 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a1Q00780 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Col8a1Q00780 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Col8a1Q00780 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC9.78□□□□□ -0.84
Col8a1Q00780 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Col8a1Q00780 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a1Q00780 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a1Q00780 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Col8a1Q00780 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a1Q00780 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Col8a1Q00780 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a1Q00780 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
Col8a1Q00780 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a1Q00780 Gm12106-201ENSMUST00000116006 1200 ntBASIC9.78□□□□□ -0.84
Col8a1Q00780 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a1Q00780 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Col8a1Q00780 Gm15610-201ENSMUST00000120584 195 ntBASIC9.78□□□□□ -0.84
Col8a1Q00780 Gm25226-201ENSMUST00000158198 123 ntBASIC9.78□□□□□ -0.84
Col8a1Q00780 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC9.78□□□□□ -0.84
Col8a1Q00780 Gm7741-201ENSMUST00000181445 989 ntBASIC9.78□□□□□ -0.84
Col8a1Q00780 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC9.78□□□□□ -0.84
Col8a1Q00780 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC9.78□□□□□ -0.84
Col8a1Q00780 AC158392.3-201ENSMUST00000224271 1284 ntBASIC9.78□□□□□ -0.84
Col8a1Q00780 Thoc7-209ENSMUST00000225325 765 ntBASIC9.78□□□□□ -0.84
Col8a1Q00780 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a1Q00780 Gm8181-201ENSMUST00000062242 669 ntBASIC9.78□□□□□ -0.84
Col8a1Q00780 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a1Q00780 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a1Q00780 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a1Q00780 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a1Q00780 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a1Q00780 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a1Q00780 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a1Q00780 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms