Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Pdlim4P70271 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Pdlim4P70271 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC9.53□□□□□ -0.88
Pdlim4P70271 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Pdlim4P70271 B9d1os-201ENSMUST00000137010 674 ntBASIC9.53□□□□□ -0.88
Pdlim4P70271 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC9.53□□□□□ -0.88
Pdlim4P70271 Mir8093-201ENSMUST00000185043 137 ntBASIC9.53□□□□□ -0.88
Pdlim4P70271 Gm5982-201ENSMUST00000196234 512 ntBASIC9.53□□□□□ -0.88
Pdlim4P70271 Gm6108-201ENSMUST00000208365 367 ntBASIC9.53□□□□□ -0.88
Pdlim4P70271 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Pdlim4P70271 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Pdlim4P70271 CT009713.8-202ENSMUST00000224732 385 ntBASIC9.53□□□□□ -0.88
Pdlim4P70271 AC131330.1-201ENSMUST00000227814 1015 ntBASIC9.53□□□□□ -0.88
Pdlim4P70271 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Pdlim4P70271 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Pdlim4P70271 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Pdlim4P70271 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
Pdlim4P70271 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Pdlim4P70271 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Pdlim4P70271 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Pdlim4P70271 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC9.53□□□□□ -0.88
Pdlim4P70271 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Pdlim4P70271 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Pdlim4P70271 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Pdlim4P70271 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Pdlim4P70271 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Pdlim4P70271 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Pdlim4P70271 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
Pdlim4P70271 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Pdlim4P70271 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Pdlim4P70271 Gm43289-201ENSMUST00000200537 1475 ntBASIC9.53□□□□□ -0.88
Pdlim4P70271 Gm7841-201ENSMUST00000122108 1629 ntBASIC9.53□□□□□ -0.88
Pdlim4P70271 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Pdlim4P70271 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Pdlim4P70271 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Pdlim4P70271 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Pdlim4P70271 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Pdlim4P70271 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Pdlim4P70271 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Pdlim4P70271 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Pdlim4P70271 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Pdlim4P70271 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Pdlim4P70271 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Pdlim4P70271 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Pdlim4P70271 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Pdlim4P70271 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Pdlim4P70271 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
Pdlim4P70271 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC9.52□□□□□ -0.89
Pdlim4P70271 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Pdlim4P70271 Gm12579-201ENSMUST00000118040 783 ntBASIC9.52□□□□□ -0.89
Pdlim4P70271 Gm6506-201ENSMUST00000119775 1136 ntBASIC9.52□□□□□ -0.89
Pdlim4P70271 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Pdlim4P70271 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Pdlim4P70271 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Pdlim4P70271 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Pdlim4P70271 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC9.52□□□□□ -0.89
Pdlim4P70271 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC9.52□□□□□ -0.89
Pdlim4P70271 Gm38151-201ENSMUST00000195085 289 ntBASIC9.52□□□□□ -0.89
Pdlim4P70271 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC9.52□□□□□ -0.89
Pdlim4P70271 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Pdlim4P70271 Gm7207-201ENSMUST00000211575 1067 ntBASIC9.52□□□□□ -0.89
Pdlim4P70271 Gm6867-201ENSMUST00000219165 425 ntBASIC9.52□□□□□ -0.89
Pdlim4P70271 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC9.52□□□□□ -0.89
Pdlim4P70271 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC9.52□□□□□ -0.89
Pdlim4P70271 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Pdlim4P70271 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Pdlim4P70271 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Pdlim4P70271 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Pdlim4P70271 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Pdlim4P70271 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Pdlim4P70271 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Pdlim4P70271 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Pdlim4P70271 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Pdlim4P70271 Gm10829-201ENSMUST00000202084 2988 ntBASIC9.52□□□□□ -0.89
Pdlim4P70271 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.89
Pdlim4P70271 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Pdlim4P70271 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Pdlim4P70271 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Pdlim4P70271 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Pdlim4P70271 Gm5380-201ENSMUST00000119296 2136 ntBASIC9.52□□□□□ -0.89
Pdlim4P70271 Gm45828-201ENSMUST00000206938 1836 ntBASIC9.52□□□□□ -0.89
Pdlim4P70271 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Pdlim4P70271 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC9.52□□□□□ -0.89
Pdlim4P70271 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Pdlim4P70271 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Pdlim4P70271 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC9.51□□□□□ -0.89
Pdlim4P70271 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Pdlim4P70271 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC9.51□□□□□ -0.89
Pdlim4P70271 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Pdlim4P70271 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC9.51□□□□□ -0.89
Pdlim4P70271 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Pdlim4P70271 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Pdlim4P70271 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Pdlim4P70271 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Pdlim4P70271 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Pdlim4P70271 Gm12165-201ENSMUST00000117047 342 ntBASIC9.51□□□□□ -0.89
Pdlim4P70271 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Pdlim4P70271 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC9.51□□□□□ -0.89
Pdlim4P70271 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC9.51□□□□□ -0.89
Pdlim4P70271 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms