Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Six5P70178 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Six5P70178 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Six5P70178 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC10.68□□□□□ -0.7
Six5P70178 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Six5P70178 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Six5P70178 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Six5P70178 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Six5P70178 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Six5P70178 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Six5P70178 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Six5P70178 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Six5P70178 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Six5P70178 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Six5P70178 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Six5P70178 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Six5P70178 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
Six5P70178 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.68□□□□□ -0.7
Six5P70178 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Six5P70178 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Six5P70178 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Six5P70178 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Six5P70178 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Six5P70178 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Six5P70178 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Six5P70178 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Six5P70178 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.68□□□□□ -0.7
Six5P70178 Gm11244-201ENSMUST00000121243 237 ntBASIC10.68□□□□□ -0.7
Six5P70178 Gm12566-201ENSMUST00000121479 359 ntBASIC10.68□□□□□ -0.7
Six5P70178 Gm8737-201ENSMUST00000122208 642 ntBASIC10.68□□□□□ -0.7
Six5P70178 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Six5P70178 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC10.68□□□□□ -0.7
Six5P70178 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Six5P70178 Mir7070-201ENSMUST00000183657 86 ntBASIC10.68□□□□□ -0.7
Six5P70178 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC10.68□□□□□ -0.7
Six5P70178 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Six5P70178 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC10.68□□□□□ -0.7
Six5P70178 Gm6722-201ENSMUST00000221586 390 ntBASIC10.68□□□□□ -0.7
Six5P70178 CT009546.1-201ENSMUST00000222573 1120 ntBASIC10.68□□□□□ -0.7
Six5P70178 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Six5P70178 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Six5P70178 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.68□□□□□ -0.7
Six5P70178 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Six5P70178 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Six5P70178 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.68□□□□□ -0.7
Six5P70178 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Six5P70178 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Six5P70178 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Six5P70178 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Six5P70178 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Six5P70178 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Six5P70178 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Six5P70178 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Six5P70178 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Six5P70178 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC10.67□□□□□ -0.7
Six5P70178 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Six5P70178 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Six5P70178 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Six5P70178 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Six5P70178 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Six5P70178 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.67□□□□□ -0.7
Six5P70178 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Six5P70178 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Six5P70178 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Six5P70178 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Six5P70178 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Six5P70178 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Six5P70178 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Six5P70178 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Six5P70178 n-R5s64-201ENSMUST00000102019 119 ntBASIC10.67□□□□□ -0.7
Six5P70178 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Six5P70178 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.67□□□□□ -0.7
Six5P70178 Gm22144-201ENSMUST00000157402 102 ntBASIC10.67□□□□□ -0.7
Six5P70178 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Six5P70178 Gm23045-201ENSMUST00000175041 96 ntBASIC10.67□□□□□ -0.7
Six5P70178 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Six5P70178 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Six5P70178 AC155637.1-201ENSMUST00000218560 636 ntBASIC10.67□□□□□ -0.7
Six5P70178 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Six5P70178 Abhd11os-203ENSMUST00000222613 363 ntBASIC10.67□□□□□ -0.7
Six5P70178 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Six5P70178 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Six5P70178 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Six5P70178 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Six5P70178 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Six5P70178 Olfr584-201ENSMUST00000098210 964 ntBASIC10.67□□□□□ -0.7
Six5P70178 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Six5P70178 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Six5P70178 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Six5P70178 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Six5P70178 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Six5P70178 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Six5P70178 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Six5P70178 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.67□□□□□ -0.7
Six5P70178 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Six5P70178 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Six5P70178 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Six5P70178 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Six5P70178 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Six5P70178 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms