Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm13445-201ENSMUST00000121664 307 ntBASIC11.69□□□□□ -0.54
Ybx1P62960 Gm25545-201ENSMUST00000122673 323 ntBASIC11.69□□□□□ -0.54
Ybx1P62960 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ybx1P62960 Gm24992-201ENSMUST00000157412 130 ntBASIC11.69□□□□□ -0.54
Ybx1P62960 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.69□□□□□ -0.54
Ybx1P62960 Gm20414-201ENSMUST00000172918 646 ntBASIC11.69□□□□□ -0.54
Ybx1P62960 Gm44323-201ENSMUST00000198689 129 ntBASIC11.69□□□□□ -0.54
Ybx1P62960 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Ybx1P62960 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.69□□□□□ -0.54
Ybx1P62960 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.69□□□□□ -0.54
Ybx1P62960 AC130477.1-201ENSMUST00000226982 420 ntBASIC11.69□□□□□ -0.54
Ybx1P62960 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ybx1P62960 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ybx1P62960 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ybx1P62960 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Ybx1P62960 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ybx1P62960 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ybx1P62960 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ybx1P62960 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ybx1P62960 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ybx1P62960 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ybx1P62960 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC11.68□□□□□ -0.54
Ybx1P62960 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ybx1P62960 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ybx1P62960 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ybx1P62960 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ybx1P62960 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ybx1P62960 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ybx1P62960 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ybx1P62960 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ybx1P62960 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Ybx1P62960 Gm11700-201ENSMUST00000119409 403 ntBASIC11.68□□□□□ -0.54
Ybx1P62960 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC11.68□□□□□ -0.54
Ybx1P62960 Gm29067-201ENSMUST00000190821 470 ntBASIC11.68□□□□□ -0.54
Ybx1P62960 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ybx1P62960 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ybx1P62960 Gm18499-201ENSMUST00000220808 1021 ntBASIC11.68□□□□□ -0.54
Ybx1P62960 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ybx1P62960 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ybx1P62960 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ybx1P62960 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ybx1P62960 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ybx1P62960 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ybx1P62960 Gm5641-201ENSMUST00000091130 1488 ntBASIC11.68□□□□□ -0.54
Ybx1P62960 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Ybx1P62960 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.68□□□□□ -0.54
Ybx1P62960 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.68□□□□□ -0.54
Ybx1P62960 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ybx1P62960 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ybx1P62960 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ybx1P62960 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ybx1P62960 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ybx1P62960 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ybx1P62960 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ybx1P62960 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ybx1P62960 Gm37744-201ENSMUST00000194616 1590 ntBASIC11.67□□□□□ -0.54
Ybx1P62960 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Ybx1P62960 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Ybx1P62960 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ybx1P62960 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ybx1P62960 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ybx1P62960 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Ybx1P62960 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ybx1P62960 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ybx1P62960 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ybx1P62960 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ybx1P62960 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ybx1P62960 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ybx1P62960 Gm11979-201ENSMUST00000119629 743 ntBASIC11.67□□□□□ -0.54
Ybx1P62960 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Ybx1P62960 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.67□□□□□ -0.54
Ybx1P62960 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ybx1P62960 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ybx1P62960 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ybx1P62960 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ybx1P62960 Gm7902-201ENSMUST00000198842 947 ntBASIC11.67□□□□□ -0.54
Ybx1P62960 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.67□□□□□ -0.54
Ybx1P62960 Gm7525-201ENSMUST00000219425 454 ntBASIC11.67□□□□□ -0.54
Ybx1P62960 Gm18065-201ENSMUST00000221395 526 ntBASIC11.67□□□□□ -0.54
Ybx1P62960 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ybx1P62960 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ybx1P62960 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ybx1P62960 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ybx1P62960 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.67□□□□□ -0.54
Ybx1P62960 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ybx1P62960 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Ybx1P62960 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.67□□□□□ -0.54
Ybx1P62960 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Ybx1P62960 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ybx1P62960 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ybx1P62960 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ybx1P62960 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ybx1P62960 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ybx1P62960 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ybx1P62960 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ybx1P62960 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.66□□□□□ -0.54
Ybx1P62960 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ybx1P62960 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ybx1P62960 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC11.66□□□□□ -0.54
Ybx1P62960 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms