Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm3P62311 Gm11735-201ENSMUST00000106377 1581 ntBASIC10.3□□□□□ -0.76
Lsm3P62311 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm3P62311 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm3P62311 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC10.3□□□□□ -0.76
Lsm3P62311 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm3P62311 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
Lsm3P62311 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC10.3□□□□□ -0.76
Lsm3P62311 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm3P62311 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Lsm3P62311 Gm8793-201ENSMUST00000183069 1303 ntBASIC10.3□□□□□ -0.76
Lsm3P62311 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm3P62311 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Lsm3P62311 Epb41l4a-201ENSMUST00000025234 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Lsm3P62311 AC149588.2-201ENSMUST00000228182 1859 ntBASIC10.3□□□□□ -0.76
Lsm3P62311 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Lsm3P62311 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 Slc12a6-204ENSMUST00000110991 4556 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.29□□□□□ -0.76
Lsm3P62311 Tti2-201ENSMUST00000098842 5039 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 AC122382.1-201ENSMUST00000225869 2371 ntBASIC10.29□□□□□ -0.76
Lsm3P62311 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Lsm3P62311 Thbs3-202ENSMUST00000119084 2993 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Lsm3P62311 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Lsm3P62311 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC10.29□□□□□ -0.76
Lsm3P62311 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 Gm28882-201ENSMUST00000185504 314 ntBASIC10.29□□□□□ -0.76
Lsm3P62311 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.29□□□□□ -0.76
Lsm3P62311 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.29□□□□□ -0.76
Lsm3P62311 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC10.29□□□□□ -0.76
Lsm3P62311 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.29□□□□□ -0.76
Lsm3P62311 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Lsm3P62311 Gm5867-201ENSMUST00000063197 592 ntBASIC10.29□□□□□ -0.76
Lsm3P62311 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Lsm3P62311 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Lsm3P62311 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.29□□□□□ -0.76
Lsm3P62311 Itgad-201ENSMUST00000033051 3965 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.29□□□□□ -0.76
Lsm3P62311 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Lsm3P62311 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.29□□□□□ -0.76
Lsm3P62311 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Lsm3P62311 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm3P62311 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm3P62311 Epc1-201ENSMUST00000028100 3965 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm3P62311 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm3P62311 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm3P62311 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
Lsm3P62311 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm3P62311 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm3P62311 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC10.28□□□□□ -0.76
Lsm3P62311 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Lsm3P62311 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC10.28□□□□□ -0.76
Lsm3P62311 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC10.28□□□□□ -0.76
Lsm3P62311 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm3P62311 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm3P62311 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC10.28□□□□□ -0.76
Lsm3P62311 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC10.28□□□□□ -0.76
Lsm3P62311 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC10.28□□□□□ -0.76
Lsm3P62311 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.28□□□□□ -0.76
Lsm3P62311 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Lsm3P62311 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC10.28□□□□□ -0.76
Lsm3P62311 Gm24196-201ENSMUST00000179161 110 ntBASIC10.28□□□□□ -0.76
Lsm3P62311 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Lsm3P62311 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm3P62311 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm3P62311 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm3P62311 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC10.28□□□□□ -0.76
Lsm3P62311 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm3P62311 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 103.4 ms