Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup43P59235 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nup43P59235 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup43P59235 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.78□□□□□ -0.68
Nup43P59235 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.78□□□□□ -0.68
Nup43P59235 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Nup43P59235 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Nup43P59235 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup43P59235 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.78□□□□□ -0.68
Nup43P59235 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Nup43P59235 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nup43P59235 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC10.77□□□□□ -0.68
Nup43P59235 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nup43P59235 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.77□□□□□ -0.68
Nup43P59235 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nup43P59235 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Nup43P59235 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nup43P59235 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nup43P59235 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nup43P59235 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nup43P59235 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nup43P59235 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nup43P59235 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Nup43P59235 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.77□□□□□ -0.69
Nup43P59235 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.77□□□□□ -0.69
Nup43P59235 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Nup43P59235 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nup43P59235 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nup43P59235 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nup43P59235 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nup43P59235 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Nup43P59235 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Nup43P59235 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC10.77□□□□□ -0.69
Nup43P59235 Gm15615-201ENSMUST00000118876 198 ntBASIC10.77□□□□□ -0.69
Nup43P59235 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nup43P59235 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC10.77□□□□□ -0.69
Nup43P59235 Gm15881-201ENSMUST00000148792 942 ntBASIC10.77□□□□□ -0.69
Nup43P59235 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC10.77□□□□□ -0.69
Nup43P59235 Mir3102-201ENSMUST00000175555 104 ntBASIC10.77□□□□□ -0.69
Nup43P59235 Gm21092-201ENSMUST00000178995 955 ntBASIC10.77□□□□□ -0.69
Nup43P59235 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nup43P59235 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.77□□□□□ -0.69
Nup43P59235 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC10.77□□□□□ -0.69
Nup43P59235 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC10.77□□□□□ -0.69
Nup43P59235 Gm9132-201ENSMUST00000210182 832 ntBASIC10.77□□□□□ -0.69
Nup43P59235 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC10.77□□□□□ -0.69
Nup43P59235 Gm8959-201ENSMUST00000213150 571 ntBASIC10.77□□□□□ -0.69
Nup43P59235 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.77□□□□□ -0.69
Nup43P59235 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC10.77□□□□□ -0.69
Nup43P59235 Gm4797-201ENSMUST00000219075 1283 ntBASIC10.77□□□□□ -0.69
Nup43P59235 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC10.77□□□□□ -0.69
Nup43P59235 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nup43P59235 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nup43P59235 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.77□□□□□ -0.69
Nup43P59235 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Nup43P59235 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Nup43P59235 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nup43P59235 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nup43P59235 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.77□□□□□ -0.69
Nup43P59235 Gm9387-201ENSMUST00000098624 1320 ntBASIC10.77□□□□□ -0.69
Nup43P59235 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nup43P59235 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.77□□□□□ -0.69
Nup43P59235 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nup43P59235 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Nup43P59235 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nup43P59235 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nup43P59235 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Nup43P59235 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC10.76□□□□□ -0.69
Nup43P59235 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup43P59235 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nup43P59235 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Nup43P59235 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup43P59235 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Nup43P59235 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup43P59235 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.76□□□□□ -0.69
Nup43P59235 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nup43P59235 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup43P59235 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.76□□□□□ -0.69
Nup43P59235 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Nup43P59235 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup43P59235 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Nup43P59235 Gm4294-201ENSMUST00000105169 614 ntBASIC10.76□□□□□ -0.69
Nup43P59235 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nup43P59235 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nup43P59235 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nup43P59235 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC10.76□□□□□ -0.69
Nup43P59235 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup43P59235 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup43P59235 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC10.76□□□□□ -0.69
Nup43P59235 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC10.76□□□□□ -0.69
Nup43P59235 Mir8115-201ENSMUST00000184992 119 ntBASIC10.76□□□□□ -0.69
Nup43P59235 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
Nup43P59235 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC10.76□□□□□ -0.69
Nup43P59235 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC10.76□□□□□ -0.69
Nup43P59235 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC10.76□□□□□ -0.69
Nup43P59235 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC10.76□□□□□ -0.69
Nup43P59235 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC10.76□□□□□ -0.69
Nup43P59235 Gm17872-201ENSMUST00000222550 532 ntBASIC10.76□□□□□ -0.69
Nup43P59235 CT573047.1-201ENSMUST00000223652 851 ntBASIC10.76□□□□□ -0.69
Nup43P59235 AC171241.1-201ENSMUST00000228144 1166 ntBASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms