Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Vps33bP59016 Gm6755-201ENSMUST00000100598 864 ntBASIC14.28□□□□□ -0.12
Vps33bP59016 Gm6740-201ENSMUST00000100617 864 ntBASIC14.28□□□□□ -0.12
Vps33bP59016 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps33bP59016 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps33bP59016 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps33bP59016 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps33bP59016 Gm11736-201ENSMUST00000121468 505 ntBASIC14.28□□□□□ -0.12
Vps33bP59016 Gm7405-201ENSMUST00000121476 1337 ntBASIC14.28□□□□□ -0.12
Vps33bP59016 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps33bP59016 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps33bP59016 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps33bP59016 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps33bP59016 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Vps33bP59016 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Vps33bP59016 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps33bP59016 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps33bP59016 Gm26943-201ENSMUST00000182295 957 ntBASIC14.28□□□□□ -0.12
Vps33bP59016 Gm26957-201ENSMUST00000182645 977 ntBASIC14.28□□□□□ -0.12
Vps33bP59016 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps33bP59016 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps33bP59016 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps33bP59016 Gm43106-201ENSMUST00000199485 637 ntBASIC14.28□□□□□ -0.12
Vps33bP59016 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Vps33bP59016 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps33bP59016 Gm44908-201ENSMUST00000208610 266 ntBASIC14.28□□□□□ -0.12
Vps33bP59016 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC14.28□□□□□ -0.12
Vps33bP59016 AC133496.1-201ENSMUST00000223891 743 ntBASIC14.28□□□□□ -0.12
Vps33bP59016 AC151836.1-201ENSMUST00000228730 1637 ntBASIC14.28□□□□□ -0.12
Vps33bP59016 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps33bP59016 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps33bP59016 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Vps33bP59016 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Vps33bP59016 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps33bP59016 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Vps33bP59016 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps33bP59016 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps33bP59016 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps33bP59016 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps33bP59016 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps33bP59016 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps33bP59016 AC122273.1-201ENSMUST00000213634 2327 ntBASIC14.27□□□□□ -0.12
Vps33bP59016 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Vps33bP59016 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vps33bP59016 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
Vps33bP59016 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps33bP59016 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps33bP59016 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps33bP59016 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps33bP59016 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps33bP59016 Gm5472-201ENSMUST00000178604 1678 ntBASIC14.27□□□□□ -0.12
Vps33bP59016 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps33bP59016 Gm43760-201ENSMUST00000202120 3015 ntBASIC14.27□□□□□ -0.12
Vps33bP59016 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps33bP59016 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps33bP59016 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Vps33bP59016 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vps33bP59016 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.27□□□□□ -0.13
Vps33bP59016 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps33bP59016 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC14.27□□□□□ -0.13
Vps33bP59016 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC14.27□□□□□ -0.13
Vps33bP59016 Gm14699-201ENSMUST00000122340 228 ntBASIC14.27□□□□□ -0.13
Vps33bP59016 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps33bP59016 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC14.27□□□□□ -0.13
Vps33bP59016 Gm27833-201ENSMUST00000184285 124 ntBASIC14.27□□□□□ -0.13
Vps33bP59016 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC14.27□□□□□ -0.13
Vps33bP59016 Gm38233-201ENSMUST00000194259 807 ntBASIC14.27□□□□□ -0.13
Vps33bP59016 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vps33bP59016 Gm18256-201ENSMUST00000209087 907 ntBASIC14.27□□□□□ -0.13
Vps33bP59016 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Vps33bP59016 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps33bP59016 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC14.27□□□□□ -0.13
Vps33bP59016 AC154461.1-201ENSMUST00000224207 1005 ntBASIC14.27□□□□□ -0.13
Vps33bP59016 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps33bP59016 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vps33bP59016 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps33bP59016 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC14.27□□□□□ -0.13
Vps33bP59016 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps33bP59016 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps33bP59016 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vps33bP59016 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Vps33bP59016 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps33bP59016 Gm44831-201ENSMUST00000208469 2989 ntBASIC14.27□□□□□ -0.13
Vps33bP59016 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps33bP59016 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps33bP59016 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Vps33bP59016 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps33bP59016 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps33bP59016 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Vps33bP59016 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps33bP59016 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps33bP59016 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps33bP59016 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps33bP59016 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Vps33bP59016 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps33bP59016 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC14.26□□□□□ -0.13
Vps33bP59016 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps33bP59016 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps33bP59016 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps33bP59016 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms