Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tpm1P58771 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tpm1P58771 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tpm1P58771 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.68□□□□□ -0.38
Tpm1P58771 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tpm1P58771 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Tpm1P58771 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tpm1P58771 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tpm1P58771 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tpm1P58771 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tpm1P58771 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tpm1P58771 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tpm1P58771 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tpm1P58771 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tpm1P58771 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tpm1P58771 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tpm1P58771 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Tpm1P58771 Gm11500-201ENSMUST00000118237 601 ntBASIC12.68□□□□□ -0.38
Tpm1P58771 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.68□□□□□ -0.38
Tpm1P58771 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tpm1P58771 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
Tpm1P58771 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
Tpm1P58771 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.68□□□□□ -0.38
Tpm1P58771 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tpm1P58771 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Tpm1P58771 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Tpm1P58771 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tpm1P58771 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.68□□□□□ -0.38
Tpm1P58771 Gm18187-201ENSMUST00000196476 984 ntBASIC12.68□□□□□ -0.38
Tpm1P58771 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.68□□□□□ -0.38
Tpm1P58771 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Tpm1P58771 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tpm1P58771 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tpm1P58771 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tpm1P58771 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tpm1P58771 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Tpm1P58771 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tpm1P58771 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Tpm1P58771 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tpm1P58771 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tpm1P58771 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tpm1P58771 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tpm1P58771 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.68□□□□□ -0.38
Tpm1P58771 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tpm1P58771 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Tpm1P58771 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tpm1P58771 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Tpm1P58771 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tpm1P58771 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tpm1P58771 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tpm1P58771 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Tpm1P58771 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tpm1P58771 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tpm1P58771 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tpm1P58771 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tpm1P58771 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tpm1P58771 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC12.67□□□□□ -0.38
Tpm1P58771 Gm10699-201ENSMUST00000098916 2130 ntBASIC12.67□□□□□ -0.38
Tpm1P58771 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tpm1P58771 Gm37333-201ENSMUST00000192904 2251 ntBASIC12.67□□□□□ -0.38
Tpm1P58771 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tpm1P58771 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Tpm1P58771 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tpm1P58771 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.67□□□□□ -0.38
Tpm1P58771 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tpm1P58771 Gm5070-201ENSMUST00000177599 862 ntBASIC12.67□□□□□ -0.38
Tpm1P58771 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tpm1P58771 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.67□□□□□ -0.38
Tpm1P58771 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.67□□□□□ -0.38
Tpm1P58771 Gm10608-202ENSMUST00000213924 676 ntBASIC12.67□□□□□ -0.38
Tpm1P58771 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tpm1P58771 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tpm1P58771 Gm5455-201ENSMUST00000058710 715 ntBASIC12.67□□□□□ -0.38
Tpm1P58771 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tpm1P58771 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tpm1P58771 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tpm1P58771 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tpm1P58771 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tpm1P58771 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tpm1P58771 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tpm1P58771 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.67□□□□□ -0.38
Tpm1P58771 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tpm1P58771 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tpm1P58771 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.67□□□□□ -0.38
Tpm1P58771 Gm6124-201ENSMUST00000188240 2580 ntBASIC12.67□□□□□ -0.38
Tpm1P58771 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Tpm1P58771 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tpm1P58771 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tpm1P58771 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tpm1P58771 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tpm1P58771 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tpm1P58771 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tpm1P58771 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tpm1P58771 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tpm1P58771 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tpm1P58771 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tpm1P58771 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tpm1P58771 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Tpm1P58771 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tpm1P58771 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms