Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh6P54276 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh6P54276 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh6P54276 Gm6024-201ENSMUST00000117850 1558 ntBASIC14.38□□□□□ -0.11
Msh6P54276 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
Msh6P54276 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh6P54276 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh6P54276 Gm5909-201ENSMUST00000119768 1281 ntBASIC14.38□□□□□ -0.11
Msh6P54276 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh6P54276 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC14.38□□□□□ -0.11
Msh6P54276 Gm9162-201ENSMUST00000182081 991 ntBASIC14.38□□□□□ -0.11
Msh6P54276 Mir7035-201ENSMUST00000184713 82 ntBASIC14.38□□□□□ -0.11
Msh6P54276 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC14.38□□□□□ -0.11
Msh6P54276 Gm43249-201ENSMUST00000200464 458 ntBASIC14.38□□□□□ -0.11
Msh6P54276 Gm42867-201ENSMUST00000202995 469 ntBASIC14.38□□□□□ -0.11
Msh6P54276 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC14.38□□□□□ -0.11
Msh6P54276 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC14.38□□□□□ -0.11
Msh6P54276 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh6P54276 Id2-203ENSMUST00000222667 958 ntBASIC14.38□□□□□ -0.11
Msh6P54276 AC115304.2-201ENSMUST00000226399 332 ntBASIC14.38□□□□□ -0.11
Msh6P54276 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh6P54276 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh6P54276 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh6P54276 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Msh6P54276 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh6P54276 AC126257.2-201ENSMUST00000215507 2300 ntBASIC14.38□□□□□ -0.11
Msh6P54276 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Msh6P54276 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh6P54276 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh6P54276 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh6P54276 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh6P54276 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh6P54276 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Msh6P54276 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Msh6P54276 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Msh6P54276 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Msh6P54276 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh6P54276 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh6P54276 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh6P54276 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Msh6P54276 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC14.38□□□□□ -0.11
Msh6P54276 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh6P54276 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC14.37□□□□□ -0.11
Msh6P54276 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh6P54276 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh6P54276 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh6P54276 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh6P54276 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC14.37□□□□□ -0.11
Msh6P54276 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Msh6P54276 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh6P54276 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC14.37□□□□□ -0.11
Msh6P54276 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Msh6P54276 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Msh6P54276 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC14.37□□□□□ -0.11
Msh6P54276 Gm45094-201ENSMUST00000207013 617 ntBASIC14.37□□□□□ -0.11
Msh6P54276 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Msh6P54276 CT030166.5-201ENSMUST00000222249 420 ntBASIC14.37□□□□□ -0.11
Msh6P54276 AC122035.1-201ENSMUST00000227576 1016 ntBASIC14.37□□□□□ -0.11
Msh6P54276 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh6P54276 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Msh6P54276 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Msh6P54276 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
Msh6P54276 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh6P54276 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh6P54276 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh6P54276 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC14.37□□□□□ -0.11
Msh6P54276 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Msh6P54276 Gm43152-201ENSMUST00000202495 1638 ntBASIC14.37□□□□□ -0.11
Msh6P54276 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC14.37□□□□□ -0.11
Msh6P54276 Gm43931-201ENSMUST00000204817 2870 ntBASIC14.37□□□□□ -0.11
Msh6P54276 Gm9915-201ENSMUST00000066196 1383 ntBASIC14.37□□□□□ -0.11
Msh6P54276 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh6P54276 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh6P54276 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Msh6P54276 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh6P54276 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh6P54276 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Msh6P54276 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Msh6P54276 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Msh6P54276 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msh6P54276 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Msh6P54276 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Msh6P54276 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msh6P54276 Gm9133-201ENSMUST00000118289 540 ntBASIC14.36□□□□□ -0.11
Msh6P54276 Mup-ps29-201ENSMUST00000122281 202 ntBASIC14.36□□□□□ -0.11
Msh6P54276 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msh6P54276 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Msh6P54276 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC14.36□□□□□ -0.11
Msh6P54276 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Msh6P54276 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Msh6P54276 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Msh6P54276 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Msh6P54276 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC14.36□□□□□ -0.11
Msh6P54276 AC162932.1-201ENSMUST00000219209 872 ntBASIC14.36□□□□□ -0.11
Msh6P54276 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC14.36□□□□□ -0.11
Msh6P54276 AC102569.1-201ENSMUST00000221563 685 ntBASIC14.36□□□□□ -0.11
Msh6P54276 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Msh6P54276 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msh6P54276 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Msh6P54276 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms