Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.31□□□□□ -0.76
Rfx3P48381 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.31□□□□□ -0.76
Rfx3P48381 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Gm4819-201ENSMUST00000182170 1009 ntBASIC10.31□□□□□ -0.76
Rfx3P48381 Gm28937-201ENSMUST00000185413 695 ntBASIC10.31□□□□□ -0.76
Rfx3P48381 Gm29400-201ENSMUST00000187208 695 ntBASIC10.31□□□□□ -0.76
Rfx3P48381 Gm28662-201ENSMUST00000188446 695 ntBASIC10.31□□□□□ -0.76
Rfx3P48381 Gm28251-201ENSMUST00000188835 695 ntBASIC10.31□□□□□ -0.76
Rfx3P48381 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Gm37318-201ENSMUST00000194325 695 ntBASIC10.31□□□□□ -0.76
Rfx3P48381 Gm38017-201ENSMUST00000194768 695 ntBASIC10.31□□□□□ -0.76
Rfx3P48381 Gm37287-201ENSMUST00000195449 695 ntBASIC10.31□□□□□ -0.76
Rfx3P48381 Gm37793-201ENSMUST00000195548 695 ntBASIC10.31□□□□□ -0.76
Rfx3P48381 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.31□□□□□ -0.76
Rfx3P48381 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Rfx3P48381 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Rfx3P48381 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Rfx3P48381 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.31□□□□□ -0.76
Rfx3P48381 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Rfx3P48381 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.31□□□□□ -0.76
Rfx3P48381 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Rfx3P48381 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Rfx3P48381 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.31□□□□□ -0.76
Rfx3P48381 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
Rfx3P48381 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rfx3P48381 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rfx3P48381 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rfx3P48381 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rfx3P48381 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC10.3□□□□□ -0.76
Rfx3P48381 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rfx3P48381 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rfx3P48381 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Rfx3P48381 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rfx3P48381 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.3□□□□□ -0.76
Rfx3P48381 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Rfx3P48381 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rfx3P48381 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rfx3P48381 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rfx3P48381 Gm23949-201ENSMUST00000104027 127 ntBASIC10.3□□□□□ -0.76
Rfx3P48381 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Rfx3P48381 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC10.3□□□□□ -0.76
Rfx3P48381 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.3□□□□□ -0.76
Rfx3P48381 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.3□□□□□ -0.76
Rfx3P48381 Gm26047-201ENSMUST00000157308 113 ntBASIC10.3□□□□□ -0.76
Rfx3P48381 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Rfx3P48381 Gm28686-201ENSMUST00000187404 609 ntBASIC10.3□□□□□ -0.76
Rfx3P48381 Gm26047-202ENSMUST00000198840 115 ntBASIC10.3□□□□□ -0.76
Rfx3P48381 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC10.3□□□□□ -0.76
Rfx3P48381 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.3□□□□□ -0.76
Rfx3P48381 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.3□□□□□ -0.76
Rfx3P48381 Gm270-201ENSMUST00000223010 976 ntBASIC10.3□□□□□ -0.76
Rfx3P48381 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rfx3P48381 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rfx3P48381 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rfx3P48381 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rfx3P48381 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rfx3P48381 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rfx3P48381 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Rfx3P48381 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rfx3P48381 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rfx3P48381 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rfx3P48381 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Rfx3P48381 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Rfx3P48381 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Rfx3P48381 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rfx3P48381 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rfx3P48381 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rfx3P48381 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rfx3P48381 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rfx3P48381 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Rfx3P48381 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rfx3P48381 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rfx3P48381 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rfx3P48381 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms