Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nedd4P46935 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nedd4P46935 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Nedd4P46935 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.71□□□□□ -0.21
Nedd4P46935 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nedd4P46935 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.22
Nedd4P46935 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nedd4P46935 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nedd4P46935 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
Nedd4P46935 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.71□□□□□ -0.22
Nedd4P46935 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nedd4P46935 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Nedd4P46935 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nedd4P46935 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd4P46935 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd4P46935 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd4P46935 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd4P46935 Gm17836-201ENSMUST00000191976 1302 ntBASIC13.7□□□□□ -0.22
Nedd4P46935 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd4P46935 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd4P46935 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd4P46935 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC13.7□□□□□ -0.22
Nedd4P46935 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nedd4P46935 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Nedd4P46935 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd4P46935 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd4P46935 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Nedd4P46935 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd4P46935 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd4P46935 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd4P46935 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd4P46935 Mir1249-201ENSMUST00000116791 98 ntBASIC13.7□□□□□ -0.22
Nedd4P46935 Gm11960-201ENSMUST00000122068 925 ntBASIC13.7□□□□□ -0.22
Nedd4P46935 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd4P46935 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nedd4P46935 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd4P46935 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nedd4P46935 Gm26957-201ENSMUST00000182645 977 ntBASIC13.7□□□□□ -0.22
Nedd4P46935 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC13.7□□□□□ -0.22
Nedd4P46935 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC13.7□□□□□ -0.22
Nedd4P46935 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Nedd4P46935 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd4P46935 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd4P46935 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nedd4P46935 Gm6304-201ENSMUST00000096579 447 ntBASIC13.7□□□□□ -0.22
Nedd4P46935 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd4P46935 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd4P46935 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd4P46935 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd4P46935 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd4P46935 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.7□□□□□ -0.22
Nedd4P46935 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd4P46935 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nedd4P46935 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd4P46935 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd4P46935 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Nedd4P46935 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nedd4P46935 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.7□□□□□ -0.22
Nedd4P46935 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Nedd4P46935 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd4P46935 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd4P46935 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd4P46935 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd4P46935 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd4P46935 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Nedd4P46935 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd4P46935 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd4P46935 Gm14006-201ENSMUST00000122132 981 ntBASIC13.69□□□□□ -0.22
Nedd4P46935 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd4P46935 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.69□□□□□ -0.22
Nedd4P46935 Gm16228-201ENSMUST00000162286 809 ntBASIC13.69□□□□□ -0.22
Nedd4P46935 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC13.69□□□□□ -0.22
Nedd4P46935 Gm5976-201ENSMUST00000180794 996 ntBASIC13.69□□□□□ -0.22
Nedd4P46935 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC13.69□□□□□ -0.22
Nedd4P46935 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd4P46935 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC13.69□□□□□ -0.22
Nedd4P46935 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd4P46935 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.69□□□□□ -0.22
Nedd4P46935 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC13.69□□□□□ -0.22
Nedd4P46935 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd4P46935 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Nedd4P46935 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC13.69□□□□□ -0.22
Nedd4P46935 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd4P46935 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd4P46935 Gm7589-201ENSMUST00000085631 534 ntBASIC13.69□□□□□ -0.22
Nedd4P46935 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC13.69□□□□□ -0.22
Nedd4P46935 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd4P46935 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd4P46935 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Nedd4P46935 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.69□□□□□ -0.22
Nedd4P46935 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd4P46935 Gm9915-201ENSMUST00000066196 1383 ntBASIC13.69□□□□□ -0.22
Nedd4P46935 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Nedd4P46935 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC13.69□□□□□ -0.22
Nedd4P46935 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd4P46935 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd4P46935 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nedd4P46935 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nedd4P46935 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nedd4P46935 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms