Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.24□□□□□ -0.61
Sox18P43680 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sox18P43680 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox18P43680 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox18P43680 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox18P43680 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.24□□□□□ -0.61
Sox18P43680 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox18P43680 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sox18P43680 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Sox18P43680 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox18P43680 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox18P43680 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sox18P43680 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox18P43680 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox18P43680 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sox18P43680 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Sox18P43680 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Sox18P43680 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox18P43680 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sox18P43680 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.23□□□□□ -0.61
Sox18P43680 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox18P43680 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox18P43680 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox18P43680 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sox18P43680 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Sox18P43680 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Sox18P43680 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Sox18P43680 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox18P43680 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sox18P43680 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox18P43680 Gm23912-201ENSMUST00000104687 87 ntBASIC11.23□□□□□ -0.61
Sox18P43680 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Sox18P43680 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Sox18P43680 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC11.23□□□□□ -0.61
Sox18P43680 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.23□□□□□ -0.61
Sox18P43680 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sox18P43680 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC11.23□□□□□ -0.61
Sox18P43680 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sox18P43680 Gm22379-201ENSMUST00000157480 131 ntBASIC11.23□□□□□ -0.61
Sox18P43680 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Sox18P43680 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Sox18P43680 Gm4207-201ENSMUST00000173144 960 ntBASIC11.23□□□□□ -0.61
Sox18P43680 Gm9630-201ENSMUST00000178304 885 ntBASIC11.23□□□□□ -0.61
Sox18P43680 Gm28011-201ENSMUST00000184097 175 ntBASIC11.23□□□□□ -0.61
Sox18P43680 Mir6941-201ENSMUST00000184711 59 ntBASIC11.23□□□□□ -0.61
Sox18P43680 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sox18P43680 Gm29018-201ENSMUST00000188707 925 ntTSL 3 BASIC11.23□□□□□ -0.61
Sox18P43680 Gm9136-201ENSMUST00000193368 454 ntBASIC11.23□□□□□ -0.61
Sox18P43680 Gm9884-201ENSMUST00000194343 1222 ntBASIC11.23□□□□□ -0.61
Sox18P43680 Gm38117-201ENSMUST00000194653 939 ntBASIC11.23□□□□□ -0.61
Sox18P43680 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC11.23□□□□□ -0.61
Sox18P43680 Gm43491-201ENSMUST00000197133 784 ntBASIC11.23□□□□□ -0.61
Sox18P43680 Gm7238-201ENSMUST00000206467 973 ntBASIC11.23□□□□□ -0.61
Sox18P43680 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox18P43680 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC11.23□□□□□ -0.61
Sox18P43680 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Sox18P43680 Gm2553-201ENSMUST00000215986 605 ntBASIC11.23□□□□□ -0.61
Sox18P43680 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.23□□□□□ -0.61
Sox18P43680 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Sox18P43680 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Sox18P43680 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox18P43680 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Sox18P43680 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Sox18P43680 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox18P43680 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.23□□□□□ -0.61
Sox18P43680 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox18P43680 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Sox18P43680 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.23□□□□□ -0.61
Sox18P43680 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sox18P43680 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox18P43680 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox18P43680 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox18P43680 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox18P43680 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox18P43680 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox18P43680 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox18P43680 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Sox18P43680 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sox18P43680 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Sox18P43680 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.22□□□□□ -0.61
Sox18P43680 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Sox18P43680 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox18P43680 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox18P43680 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox18P43680 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox18P43680 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox18P43680 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox18P43680 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Sox18P43680 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox18P43680 Gm5419-201ENSMUST00000119301 527 ntBASIC11.22□□□□□ -0.61
Sox18P43680 Gm15741-201ENSMUST00000119401 754 ntBASIC11.22□□□□□ -0.61
Sox18P43680 1700016H13Rik-202ENSMUST00000119824 1447 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Sox18P43680 Gm12274-201ENSMUST00000120062 385 ntBASIC11.22□□□□□ -0.61
Sox18P43680 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Sox18P43680 Gm16234-201ENSMUST00000124976 815 ntTSL 5 BASIC11.22□□□□□ -0.61
Sox18P43680 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox18P43680 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Sox18P43680 Gm26368-201ENSMUST00000157826 118 ntBASIC11.22□□□□□ -0.61
Sox18P43680 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC11.22□□□□□ -0.61
Sox18P43680 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms