Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx2P43241 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx2P43241 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC10.84□□□□□ -0.67
Cdx2P43241 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx2P43241 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cdx2P43241 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx2P43241 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Cdx2P43241 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx2P43241 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx2P43241 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx2P43241 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx2P43241 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
Cdx2P43241 Snord23-201ENSMUST00000116828 109 ntBASIC10.84□□□□□ -0.67
Cdx2P43241 Gm13039-201ENSMUST00000118638 794 ntBASIC10.84□□□□□ -0.67
Cdx2P43241 Gm5909-201ENSMUST00000119768 1281 ntBASIC10.84□□□□□ -0.67
Cdx2P43241 Gm5555-201ENSMUST00000120352 1111 ntBASIC10.84□□□□□ -0.67
Cdx2P43241 Gm11993-201ENSMUST00000121861 820 ntBASIC10.84□□□□□ -0.67
Cdx2P43241 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC10.84□□□□□ -0.67
Cdx2P43241 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.84□□□□□ -0.67
Cdx2P43241 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC10.84□□□□□ -0.67
Cdx2P43241 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx2P43241 Gm4903-201ENSMUST00000210462 405 ntBASIC10.84□□□□□ -0.67
Cdx2P43241 AC122024.3-201ENSMUST00000217719 294 ntBASIC10.84□□□□□ -0.67
Cdx2P43241 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC10.84□□□□□ -0.67
Cdx2P43241 CT010480.2-201ENSMUST00000225424 737 ntBASIC10.84□□□□□ -0.67
Cdx2P43241 AC102847.1-202ENSMUST00000226313 1245 ntBASIC10.84□□□□□ -0.67
Cdx2P43241 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx2P43241 Gm9791-201ENSMUST00000060997 447 ntBASIC10.84□□□□□ -0.67
Cdx2P43241 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx2P43241 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Cdx2P43241 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx2P43241 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx2P43241 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx2P43241 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx2P43241 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.84□□□□□ -0.67
Cdx2P43241 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx2P43241 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx2P43241 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx2P43241 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cdx2P43241 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx2P43241 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx2P43241 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx2P43241 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx2P43241 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cdx2P43241 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cdx2P43241 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx2P43241 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx2P43241 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx2P43241 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdx2P43241 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.83□□□□□ -0.68
Cdx2P43241 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.83□□□□□ -0.68
Cdx2P43241 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Cdx2P43241 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC10.83□□□□□ -0.68
Cdx2P43241 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC10.83□□□□□ -0.68
Cdx2P43241 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Cdx2P43241 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 Gm12906-201ENSMUST00000154610 441 ntBASIC10.83□□□□□ -0.68
Cdx2P43241 Gm26368-201ENSMUST00000157826 118 ntBASIC10.83□□□□□ -0.68
Cdx2P43241 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC10.83□□□□□ -0.68
Cdx2P43241 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC10.83□□□□□ -0.68
Cdx2P43241 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.83□□□□□ -0.68
Cdx2P43241 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.83□□□□□ -0.68
Cdx2P43241 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.83□□□□□ -0.68
Cdx2P43241 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdx2P43241 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdx2P43241 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cdx2P43241 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 99.8 ms