Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox6P40645 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Sox6P40645 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Sox6P40645 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.73□□□□□ -0.69
Sox6P40645 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Sox6P40645 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Sox6P40645 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Sox6P40645 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Sox6P40645 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Sox6P40645 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Sox6P40645 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.72□□□□□ -0.69
Sox6P40645 Gm5616-201ENSMUST00000165252 384 ntBASIC10.72□□□□□ -0.69
Sox6P40645 Gm8741-201ENSMUST00000174736 384 ntBASIC10.72□□□□□ -0.69
Sox6P40645 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Gm28071-201ENSMUST00000190355 478 ntBASIC10.72□□□□□ -0.69
Sox6P40645 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.72□□□□□ -0.69
Sox6P40645 Gm43002-201ENSMUST00000200310 155 ntBASIC10.72□□□□□ -0.69
Sox6P40645 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.72□□□□□ -0.69
Sox6P40645 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC10.72□□□□□ -0.69
Sox6P40645 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC10.72□□□□□ -0.69
Sox6P40645 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.72□□□□□ -0.69
Sox6P40645 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Sox6P40645 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.72□□□□□ -0.69
Sox6P40645 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.72□□□□□ -0.69
Sox6P40645 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Sox6P40645 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sox6P40645 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sox6P40645 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox6P40645 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Sox6P40645 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Sox6P40645 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox6P40645 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox6P40645 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sox6P40645 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC10.71□□□□□ -0.69
Sox6P40645 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Sox6P40645 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox6P40645 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Sox6P40645 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Sox6P40645 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox6P40645 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC10.71□□□□□ -0.69
Sox6P40645 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox6P40645 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.71□□□□□ -0.69
Sox6P40645 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Sox6P40645 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sox6P40645 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sox6P40645 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.71□□□□□ -0.69
Sox6P40645 Gm24749-201ENSMUST00000157838 343 ntBASIC10.71□□□□□ -0.69
Sox6P40645 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sox6P40645 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sox6P40645 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Sox6P40645 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Sox6P40645 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sox6P40645 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.71□□□□□ -0.69
Sox6P40645 Gm43184-201ENSMUST00000197247 542 ntBASIC10.71□□□□□ -0.69
Sox6P40645 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sox6P40645 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Sox6P40645 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.71□□□□□ -0.69
Sox6P40645 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sox6P40645 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.71□□□□□ -0.69
Sox6P40645 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox6P40645 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.71□□□□□ -0.69
Sox6P40645 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.71□□□□□ -0.69
Sox6P40645 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.71□□□□□ -0.69
Sox6P40645 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC10.71□□□□□ -0.69
Sox6P40645 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox6P40645 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox6P40645 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms