Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcl12P40224 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcl12P40224 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC11.73□□□□□ -0.53
Cxcl12P40224 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC11.73□□□□□ -0.53
Cxcl12P40224 Gm16165-201ENSMUST00000160140 795 ntBASIC11.73□□□□□ -0.53
Cxcl12P40224 Gm16228-201ENSMUST00000162286 809 ntBASIC11.73□□□□□ -0.53
Cxcl12P40224 Olfml3-204ENSMUST00000169286 874 ntBASIC11.73□□□□□ -0.53
Cxcl12P40224 Gm20493-201ENSMUST00000173706 213 ntBASIC11.73□□□□□ -0.53
Cxcl12P40224 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcl12P40224 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cxcl12P40224 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcl12P40224 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC11.73□□□□□ -0.53
Cxcl12P40224 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC11.73□□□□□ -0.53
Cxcl12P40224 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.73□□□□□ -0.53
Cxcl12P40224 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcl12P40224 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.73□□□□□ -0.53
Cxcl12P40224 Gm8226-201ENSMUST00000190511 798 ntBASIC11.73□□□□□ -0.53
Cxcl12P40224 Gm17836-201ENSMUST00000191976 1302 ntBASIC11.73□□□□□ -0.53
Cxcl12P40224 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcl12P40224 Gm17936-201ENSMUST00000199413 988 ntBASIC11.73□□□□□ -0.53
Cxcl12P40224 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC11.73□□□□□ -0.53
Cxcl12P40224 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC11.73□□□□□ -0.53
Cxcl12P40224 AC241616.1-201ENSMUST00000213741 166 ntBASIC11.73□□□□□ -0.53
Cxcl12P40224 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Cxcl12P40224 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.73□□□□□ -0.53
Cxcl12P40224 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC11.73□□□□□ -0.53
Cxcl12P40224 AC134913.2-201ENSMUST00000225017 771 ntBASIC11.73□□□□□ -0.53
Cxcl12P40224 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcl12P40224 AC154477.1-201ENSMUST00000226515 773 ntBASIC11.73□□□□□ -0.53
Cxcl12P40224 AC137842.2-201ENSMUST00000227734 797 ntBASIC11.73□□□□□ -0.53
Cxcl12P40224 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcl12P40224 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcl12P40224 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcl12P40224 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcl12P40224 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcl12P40224 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Cxcl12P40224 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcl12P40224 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Cxcl12P40224 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cxcl12P40224 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcl12P40224 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcl12P40224 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcl12P40224 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcl12P40224 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcl12P40224 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcl12P40224 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcl12P40224 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cxcl12P40224 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl12P40224 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl12P40224 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Cxcl12P40224 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl12P40224 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl12P40224 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.72□□□□□ -0.53
Cxcl12P40224 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl12P40224 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cxcl12P40224 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.72□□□□□ -0.53
Cxcl12P40224 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl12P40224 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl12P40224 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.72□□□□□ -0.53
Cxcl12P40224 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC11.72□□□□□ -0.53
Cxcl12P40224 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl12P40224 Gm12470-201ENSMUST00000117239 1049 ntBASIC11.72□□□□□ -0.53
Cxcl12P40224 Gm16209-201ENSMUST00000118457 627 ntBASIC11.72□□□□□ -0.53
Cxcl12P40224 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC11.72□□□□□ -0.53
Cxcl12P40224 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC11.72□□□□□ -0.53
Cxcl12P40224 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC11.72□□□□□ -0.53
Cxcl12P40224 Gm10171-201ENSMUST00000126220 628 ntBASIC11.72□□□□□ -0.53
Cxcl12P40224 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl12P40224 Gm25394-201ENSMUST00000157338 133 ntBASIC11.72□□□□□ -0.53
Cxcl12P40224 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl12P40224 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl12P40224 Gm4705-201ENSMUST00000177415 354 ntBASIC11.72□□□□□ -0.53
Cxcl12P40224 Gm5808-201ENSMUST00000178090 357 ntBASIC11.72□□□□□ -0.53
Cxcl12P40224 Gm43726-201ENSMUST00000199110 775 ntBASIC11.72□□□□□ -0.53
Cxcl12P40224 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl12P40224 Gm44640-201ENSMUST00000206894 247 ntBASIC11.72□□□□□ -0.53
Cxcl12P40224 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC11.72□□□□□ -0.53
Cxcl12P40224 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl12P40224 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl12P40224 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl12P40224 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl12P40224 Gm10233-201ENSMUST00000089275 628 ntBASIC11.72□□□□□ -0.53
Cxcl12P40224 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Cxcl12P40224 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl12P40224 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.72□□□□□ -0.53
Cxcl12P40224 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl12P40224 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl12P40224 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11.72□□□□□ -0.53
Cxcl12P40224 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl12P40224 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl12P40224 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl12P40224 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl12P40224 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Cxcl12P40224 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl12P40224 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cxcl12P40224 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cxcl12P40224 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Cxcl12P40224 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cxcl12P40224 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cxcl12P40224 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms