Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm28180-201ENSMUST00000189608 722 ntBASIC16.7■□□□□ 0.26
Chd1P40201 1110025M09Rik-201ENSMUST00000192082 855 ntBASIC16.7■□□□□ 0.26
Chd1P40201 Crip1-206ENSMUST00000200553 516 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Chd1P40201 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chd1P40201 Gm32772-203ENSMUST00000207022 675 ntTSL 3 BASIC16.7■□□□□ 0.26
Chd1P40201 Saa-ps-201ENSMUST00000211148 320 ntBASIC16.7■□□□□ 0.26
Chd1P40201 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chd1P40201 Gm45719-201ENSMUST00000207954 1662 ntBASIC16.7■□□□□ 0.26
Chd1P40201 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd1P40201 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd1P40201 AC109214.1-201ENSMUST00000219520 1372 ntBASIC16.7■□□□□ 0.26
Chd1P40201 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd1P40201 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd1P40201 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC16.7■□□□□ 0.26
Chd1P40201 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chd1P40201 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd1P40201 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Chd1P40201 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chd1P40201 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chd1P40201 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd1P40201 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd1P40201 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Chd1P40201 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd1P40201 Olfr62-201ENSMUST00000102666 949 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Chd1P40201 Rpain-202ENSMUST00000108529 282 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chd1P40201 Gm11929-201ENSMUST00000118175 945 ntBASIC16.7■□□□□ 0.26
Chd1P40201 Gm12679-201ENSMUST00000123899 636 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chd1P40201 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC16.7■□□□□ 0.26
Chd1P40201 Gm13778-202ENSMUST00000146633 537 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chd1P40201 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC16.7■□□□□ 0.26
Chd1P40201 Mipep-ps-201ENSMUST00000177439 291 ntBASIC16.7■□□□□ 0.26
Chd1P40201 Gm24180-201ENSMUST00000179961 110 ntBASIC16.7■□□□□ 0.26
Chd1P40201 Gm3052-201ENSMUST00000186409 829 ntBASIC16.7■□□□□ 0.26
Chd1P40201 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd1P40201 AC122459.4-201ENSMUST00000228654 551 ntBASIC16.7■□□□□ 0.26
Chd1P40201 Cypt2-201ENSMUST00000041758 697 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd1P40201 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd1P40201 1110017D15Rik-202ENSMUST00000095126 884 ntTSL 3 BASIC16.7■□□□□ 0.26
Chd1P40201 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd1P40201 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd1P40201 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chd1P40201 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chd1P40201 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chd1P40201 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Chd1P40201 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd1P40201 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd1P40201 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Chd1P40201 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd1P40201 Gm16518-201ENSMUST00000117960 508 ntBASIC16.69■□□□□ 0.26
Chd1P40201 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC16.69■□□□□ 0.26
Chd1P40201 D730045A05Rik-201ENSMUST00000159260 1269 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chd1P40201 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chd1P40201 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC16.69■□□□□ 0.26
Chd1P40201 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chd1P40201 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Chd1P40201 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd1P40201 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd1P40201 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chd1P40201 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Chd1P40201 Gm46339-201ENSMUST00000222720 3539 ntBASIC16.69■□□□□ 0.26
Chd1P40201 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1P40201 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1P40201 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1P40201 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1P40201 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1P40201 Gm12637-201ENSMUST00000130501 368 ntTSL 3 BASIC16.68■□□□□ 0.26
Chd1P40201 Maats1os-201ENSMUST00000133496 326 ntTSL 3 BASIC16.68■□□□□ 0.26
Chd1P40201 Gm22669-201ENSMUST00000158723 318 ntBASIC16.68■□□□□ 0.26
Chd1P40201 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC16.68■□□□□ 0.26
Chd1P40201 Gm6970-201ENSMUST00000169692 666 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Chd1P40201 Gm37819-201ENSMUST00000194626 1065 ntBASIC16.68■□□□□ 0.26
Chd1P40201 Cxcl3-201ENSMUST00000031326 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1P40201 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1P40201 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Chd1P40201 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1P40201 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1P40201 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Chd1P40201 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1P40201 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1P40201 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1P40201 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1P40201 Ccl6-201ENSMUST00000019071 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1P40201 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Chd1P40201 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1P40201 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1P40201 1700092E19Rik-202ENSMUST00000154703 1650 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1P40201 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC16.68■□□□□ 0.26
Chd1P40201 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1P40201 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC16.68■□□□□ 0.26
Chd1P40201 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chd1P40201 Pabpc5-202ENSMUST00000113366 2243 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Chd1P40201 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chd1P40201 Gm24981-201ENSMUST00000104459 132 ntBASIC16.67■□□□□ 0.26
Chd1P40201 Gm8482-201ENSMUST00000117972 471 ntBASIC16.67■□□□□ 0.26
Chd1P40201 Gm13841-201ENSMUST00000118829 483 ntBASIC16.67■□□□□ 0.26
Chd1P40201 Gm11449-201ENSMUST00000119175 476 ntBASIC16.67■□□□□ 0.26
Chd1P40201 Gm13543-201ENSMUST00000121230 796 ntBASIC16.67■□□□□ 0.26
Chd1P40201 Gm7138-201ENSMUST00000167669 693 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Chd1P40201 Scgb1b21-201ENSMUST00000170232 268 ntBASIC16.67■□□□□ 0.26
Chd1P40201 Gm8210-201ENSMUST00000178557 483 ntBASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms