Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm38312-201ENSMUST00000195426 1746 ntBASIC14.72□□□□□ -0.05
Col18a1P39061 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col18a1P39061 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC14.72□□□□□ -0.05
Col18a1P39061 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col18a1P39061 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Col18a1P39061 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Col18a1P39061 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col18a1P39061 Gm23908-201ENSMUST00000104599 132 ntBASIC14.72□□□□□ -0.05
Col18a1P39061 Gm14370-201ENSMUST00000122460 868 ntBASIC14.72□□□□□ -0.05
Col18a1P39061 Gm15273-201ENSMUST00000142302 868 ntBASIC14.72□□□□□ -0.05
Col18a1P39061 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col18a1P39061 Gm7023-201ENSMUST00000147295 868 ntBASIC14.72□□□□□ -0.05
Col18a1P39061 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC14.72□□□□□ -0.05
Col18a1P39061 Gm14357-201ENSMUST00000178352 868 ntBASIC14.72□□□□□ -0.05
Col18a1P39061 Gm14361-201ENSMUST00000178547 868 ntBASIC14.72□□□□□ -0.05
Col18a1P39061 Gm14348-201ENSMUST00000179183 868 ntBASIC14.72□□□□□ -0.05
Col18a1P39061 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col18a1P39061 Rwdd2a-203ENSMUST00000185566 1054 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Col18a1P39061 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col18a1P39061 Gm37486-201ENSMUST00000195663 405 ntBASIC14.72□□□□□ -0.05
Col18a1P39061 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC14.72□□□□□ -0.05
Col18a1P39061 AC123533.3-201ENSMUST00000228056 454 ntBASIC14.72□□□□□ -0.05
Col18a1P39061 Gm6378-201ENSMUST00000084199 444 ntBASIC14.72□□□□□ -0.05
Col18a1P39061 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col18a1P39061 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col18a1P39061 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14.72□□□□□ -0.05
Col18a1P39061 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col18a1P39061 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col18a1P39061 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col18a1P39061 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col18a1P39061 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col18a1P39061 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col18a1P39061 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Col18a1P39061 Gm11929-201ENSMUST00000118175 945 ntBASIC14.71□□□□□ -0.05
Col18a1P39061 1700112J05Rik-201ENSMUST00000129353 793 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col18a1P39061 Gm26208-201ENSMUST00000158677 124 ntBASIC14.71□□□□□ -0.05
Col18a1P39061 Gm17171-201ENSMUST00000168048 534 ntTSL 3 BASIC14.71□□□□□ -0.05
Col18a1P39061 D130017N08Rik-201ENSMUST00000180460 510 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col18a1P39061 Gm26698-201ENSMUST00000181290 971 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col18a1P39061 Gm18182-201ENSMUST00000191380 1251 ntBASIC14.71□□□□□ -0.05
Col18a1P39061 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col18a1P39061 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col18a1P39061 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC14.71□□□□□ -0.05
Col18a1P39061 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col18a1P39061 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col18a1P39061 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col18a1P39061 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col18a1P39061 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col18a1P39061 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Col18a1P39061 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.71□□□□□ -0.05
Col18a1P39061 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.71□□□□□ -0.06
Col18a1P39061 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Col18a1P39061 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col18a1P39061 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col18a1P39061 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Col18a1P39061 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Col18a1P39061 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col18a1P39061 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col18a1P39061 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col18a1P39061 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Col18a1P39061 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col18a1P39061 Gm12420-201ENSMUST00000119869 1048 ntBASIC14.7□□□□□ -0.06
Col18a1P39061 Gm8163-201ENSMUST00000122020 1060 ntBASIC14.7□□□□□ -0.06
Col18a1P39061 AC123698.1-201ENSMUST00000227090 402 ntBASIC14.7□□□□□ -0.06
Col18a1P39061 Olfr761-201ENSMUST00000049620 1029 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Col18a1P39061 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC14.7□□□□□ -0.06
Col18a1P39061 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Col18a1P39061 Gm43622-201ENSMUST00000200140 2019 ntBASIC14.7□□□□□ -0.06
Col18a1P39061 Adgrv1-214ENSMUST00000224088 1492 ntBASIC14.7□□□□□ -0.06
Col18a1P39061 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col18a1P39061 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col18a1P39061 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col18a1P39061 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col18a1P39061 Cd74-203ENSMUST00000167610 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col18a1P39061 Gfra2-203ENSMUST00000227697 1323 ntBASIC14.7□□□□□ -0.06
Col18a1P39061 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC14.7□□□□□ -0.06
Col18a1P39061 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.7□□□□□ -0.06
Col18a1P39061 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col18a1P39061 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col18a1P39061 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col18a1P39061 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.7□□□□□ -0.06
Col18a1P39061 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col18a1P39061 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col18a1P39061 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col18a1P39061 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col18a1P39061 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col18a1P39061 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col18a1P39061 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Col18a1P39061 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col18a1P39061 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col18a1P39061 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col18a1P39061 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.7□□□□□ -0.06
Col18a1P39061 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC14.7□□□□□ -0.06
Col18a1P39061 Gm6425-201ENSMUST00000136332 790 ntBASIC14.7□□□□□ -0.06
Col18a1P39061 Optc-204ENSMUST00000149380 1180 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col18a1P39061 Gm15587-202ENSMUST00000156403 709 ntTSL 5 BASIC14.7□□□□□ -0.06
Col18a1P39061 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col18a1P39061 Gm3052-201ENSMUST00000186409 829 ntBASIC14.7□□□□□ -0.06
Col18a1P39061 Gm30652-201ENSMUST00000199103 430 ntBASIC14.7□□□□□ -0.06
Col18a1P39061 3830406C13Rik-205ENSMUST00000223702 900 ntBASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms