Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdh4P39038 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.94□□□□□ -0.66
Cdh4P39038 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.94□□□□□ -0.66
Cdh4P39038 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh4P39038 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Cdh4P39038 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh4P39038 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.94□□□□□ -0.66
Cdh4P39038 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdh4P39038 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh4P39038 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh4P39038 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC10.94□□□□□ -0.66
Cdh4P39038 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh4P39038 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.94□□□□□ -0.66
Cdh4P39038 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh4P39038 Gm15725-201ENSMUST00000119947 1090 ntBASIC10.94□□□□□ -0.66
Cdh4P39038 Gm9089-201ENSMUST00000122027 526 ntBASIC10.94□□□□□ -0.66
Cdh4P39038 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC10.94□□□□□ -0.66
Cdh4P39038 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.94□□□□□ -0.66
Cdh4P39038 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh4P39038 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh4P39038 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh4P39038 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdh4P39038 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC10.94□□□□□ -0.66
Cdh4P39038 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Cdh4P39038 Gm7504-201ENSMUST00000201449 424 ntBASIC10.94□□□□□ -0.66
Cdh4P39038 Gm43947-201ENSMUST00000203019 959 ntBASIC10.94□□□□□ -0.66
Cdh4P39038 Gm8574-201ENSMUST00000203207 924 ntBASIC10.94□□□□□ -0.66
Cdh4P39038 Gm43966-201ENSMUST00000203301 612 ntBASIC10.94□□□□□ -0.66
Cdh4P39038 Gm45118-201ENSMUST00000208928 825 ntBASIC10.94□□□□□ -0.66
Cdh4P39038 Gm9132-201ENSMUST00000210182 832 ntBASIC10.94□□□□□ -0.66
Cdh4P39038 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh4P39038 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdh4P39038 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.94□□□□□ -0.66
Cdh4P39038 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdh4P39038 AC115122.1-201ENSMUST00000224850 1040 ntBASIC10.94□□□□□ -0.66
Cdh4P39038 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh4P39038 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Cdh4P39038 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh4P39038 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh4P39038 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh4P39038 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.94□□□□□ -0.66
Cdh4P39038 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh4P39038 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh4P39038 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.94□□□□□ -0.66
Cdh4P39038 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh4P39038 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh4P39038 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Cdh4P39038 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh4P39038 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh4P39038 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh4P39038 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh4P39038 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh4P39038 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh4P39038 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Cdh4P39038 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh4P39038 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.93□□□□□ -0.66
Cdh4P39038 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh4P39038 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh4P39038 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh4P39038 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh4P39038 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh4P39038 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cdh4P39038 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh4P39038 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cdh4P39038 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh4P39038 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cdh4P39038 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cdh4P39038 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Cdh4P39038 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC10.93□□□□□ -0.66
Cdh4P39038 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC10.93□□□□□ -0.66
Cdh4P39038 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh4P39038 Gm22902-201ENSMUST00000158488 302 ntBASIC10.93□□□□□ -0.66
Cdh4P39038 Gm9550-201ENSMUST00000161130 862 ntBASIC10.93□□□□□ -0.66
Cdh4P39038 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC10.93□□□□□ -0.66
Cdh4P39038 Gm21092-201ENSMUST00000178995 955 ntBASIC10.93□□□□□ -0.66
Cdh4P39038 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Cdh4P39038 Gm37981-201ENSMUST00000194280 535 ntBASIC10.93□□□□□ -0.66
Cdh4P39038 Gm44008-201ENSMUST00000204345 412 ntBASIC10.93□□□□□ -0.66
Cdh4P39038 Gm43916-201ENSMUST00000205062 967 ntBASIC10.93□□□□□ -0.66
Cdh4P39038 Gm5996-201ENSMUST00000211110 718 ntBASIC10.93□□□□□ -0.66
Cdh4P39038 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh4P39038 Gm4797-201ENSMUST00000219075 1283 ntBASIC10.93□□□□□ -0.66
Cdh4P39038 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.93□□□□□ -0.66
Cdh4P39038 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.93□□□□□ -0.66
Cdh4P39038 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Cdh4P39038 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh4P39038 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh4P39038 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh4P39038 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cdh4P39038 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh4P39038 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh4P39038 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh4P39038 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh4P39038 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cdh4P39038 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh4P39038 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh4P39038 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cdh4P39038 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh4P39038 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh4P39038 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms