Protein–RNA interactions for Protein: P33215

Nedd1, Protein NEDD1, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd1P33215 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nedd1P33215 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.79□□□□□ -0.36
Nedd1P33215 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.79□□□□□ -0.36
Nedd1P33215 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.79□□□□□ -0.36
Nedd1P33215 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd1P33215 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd1P33215 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd1P33215 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nedd1P33215 Gm43152-201ENSMUST00000202495 1638 ntBASIC12.78□□□□□ -0.36
Nedd1P33215 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Nedd1P33215 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd1P33215 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd1P33215 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd1P33215 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nedd1P33215 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Nedd1P33215 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.78□□□□□ -0.36
Nedd1P33215 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd1P33215 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.78□□□□□ -0.36
Nedd1P33215 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd1P33215 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC12.78□□□□□ -0.36
Nedd1P33215 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd1P33215 Gm22442-201ENSMUST00000157256 144 ntBASIC12.78□□□□□ -0.36
Nedd1P33215 Gm23153-201ENSMUST00000175323 313 ntBASIC12.78□□□□□ -0.36
Nedd1P33215 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.78□□□□□ -0.36
Nedd1P33215 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Nedd1P33215 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd1P33215 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd1P33215 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nedd1P33215 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.78□□□□□ -0.36
Nedd1P33215 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nedd1P33215 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd1P33215 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd1P33215 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
Nedd1P33215 AC155245.1-201ENSMUST00000222266 1804 ntBASIC12.78□□□□□ -0.36
Nedd1P33215 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.78□□□□□ -0.36
Nedd1P33215 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd1P33215 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nedd1P33215 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.78□□□□□ -0.36
Nedd1P33215 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nedd1P33215 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nedd1P33215 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nedd1P33215 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nedd1P33215 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nedd1P33215 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Nedd1P33215 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nedd1P33215 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nedd1P33215 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nedd1P33215 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nedd1P33215 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Nedd1P33215 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Nedd1P33215 Gm14398-201ENSMUST00000117287 1073 ntBASIC12.77□□□□□ -0.37
Nedd1P33215 Gm12463-201ENSMUST00000118271 849 ntBASIC12.77□□□□□ -0.37
Nedd1P33215 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.77□□□□□ -0.37
Nedd1P33215 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nedd1P33215 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.77□□□□□ -0.37
Nedd1P33215 Mir6407-201ENSMUST00000184510 101 ntBASIC12.77□□□□□ -0.37
Nedd1P33215 Gm5100-201ENSMUST00000195631 589 ntBASIC12.77□□□□□ -0.37
Nedd1P33215 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nedd1P33215 Gm45219-201ENSMUST00000205602 465 ntBASIC12.77□□□□□ -0.37
Nedd1P33215 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.77□□□□□ -0.37
Nedd1P33215 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.77□□□□□ -0.37
Nedd1P33215 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.77□□□□□ -0.37
Nedd1P33215 AC134248.1-201ENSMUST00000216113 1176 ntBASIC12.77□□□□□ -0.37
Nedd1P33215 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.77□□□□□ -0.37
Nedd1P33215 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.77□□□□□ -0.37
Nedd1P33215 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nedd1P33215 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Nedd1P33215 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Nedd1P33215 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC12.77□□□□□ -0.37
Nedd1P33215 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nedd1P33215 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nedd1P33215 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nedd1P33215 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nedd1P33215 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nedd1P33215 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nedd1P33215 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nedd1P33215 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nedd1P33215 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.77□□□□□ -0.37
Nedd1P33215 Gm37651-201ENSMUST00000194679 1494 ntBASIC12.77□□□□□ -0.37
Nedd1P33215 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Nedd1P33215 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nedd1P33215 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nedd1P33215 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nedd1P33215 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd1P33215 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd1P33215 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd1P33215 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd1P33215 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Nedd1P33215 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.76□□□□□ -0.37
Nedd1P33215 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd1P33215 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.76□□□□□ -0.37
Nedd1P33215 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd1P33215 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd1P33215 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd1P33215 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Nedd1P33215 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd1P33215 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nedd1P33215 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.76□□□□□ -0.37
Nedd1P33215 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.76□□□□□ -0.37
Nedd1P33215 Gm9133-201ENSMUST00000118289 540 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms