Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a11P31650 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a11P31650 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a11P31650 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Slc6a11P31650 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.84□□□□□ -0.67
Slc6a11P31650 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC10.84□□□□□ -0.67
Slc6a11P31650 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.84□□□□□ -0.67
Slc6a11P31650 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Slc6a11P31650 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a11P31650 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC10.84□□□□□ -0.67
Slc6a11P31650 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a11P31650 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.84□□□□□ -0.67
Slc6a11P31650 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC10.84□□□□□ -0.67
Slc6a11P31650 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a11P31650 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.84□□□□□ -0.67
Slc6a11P31650 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a11P31650 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.84□□□□□ -0.67
Slc6a11P31650 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.84□□□□□ -0.67
Slc6a11P31650 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a11P31650 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.84□□□□□ -0.67
Slc6a11P31650 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a11P31650 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a11P31650 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a11P31650 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a11P31650 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Slc6a11P31650 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a11P31650 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a11P31650 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a11P31650 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.84□□□□□ -0.67
Slc6a11P31650 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.84□□□□□ -0.67
Slc6a11P31650 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a11P31650 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.84□□□□□ -0.67
Slc6a11P31650 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a11P31650 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc6a11P31650 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a11P31650 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a11P31650 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a11P31650 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Slc6a11P31650 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Slc6a11P31650 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a11P31650 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Slc6a11P31650 Btrc-209ENSMUST00000224478 2194 ntBASIC10.83□□□□□ -0.68
Slc6a11P31650 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Slc6a11P31650 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a11P31650 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a11P31650 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Slc6a11P31650 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a11P31650 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.83□□□□□ -0.68
Slc6a11P31650 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a11P31650 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a11P31650 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.83□□□□□ -0.68
Slc6a11P31650 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a11P31650 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Slc6a11P31650 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a11P31650 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.83□□□□□ -0.68
Slc6a11P31650 Gm12165-201ENSMUST00000117047 342 ntBASIC10.83□□□□□ -0.68
Slc6a11P31650 Gm13035-201ENSMUST00000117496 342 ntBASIC10.83□□□□□ -0.68
Slc6a11P31650 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Slc6a11P31650 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.83□□□□□ -0.68
Slc6a11P31650 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a11P31650 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a11P31650 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a11P31650 Gm9540-201ENSMUST00000188230 478 ntBASIC10.83□□□□□ -0.68
Slc6a11P31650 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a11P31650 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC10.83□□□□□ -0.68
Slc6a11P31650 Gm18065-201ENSMUST00000221395 526 ntBASIC10.83□□□□□ -0.68
Slc6a11P31650 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a11P31650 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a11P31650 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a11P31650 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a11P31650 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a11P31650 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a11P31650 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Slc6a11P31650 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a11P31650 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Slc6a11P31650 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a11P31650 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Slc6a11P31650 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Slc6a11P31650 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a11P31650 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.83□□□□□ -0.68
Slc6a11P31650 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a11P31650 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Slc6a11P31650 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a11P31650 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a11P31650 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a11P31650 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Slc6a11P31650 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc6a11P31650 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Slc6a11P31650 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Slc6a11P31650 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Slc6a11P31650 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms