Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Vcam1P29533 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Vcam1P29533 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vcam1P29533 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcam1P29533 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcam1P29533 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vcam1P29533 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Vcam1P29533 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC13.05□□□□□ -0.32
Vcam1P29533 Gm12986-201ENSMUST00000119037 967 ntBASIC13.05□□□□□ -0.32
Vcam1P29533 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vcam1P29533 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcam1P29533 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC13.05□□□□□ -0.32
Vcam1P29533 Gm16165-201ENSMUST00000160140 795 ntBASIC13.05□□□□□ -0.32
Vcam1P29533 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Vcam1P29533 Gm17221-201ENSMUST00000163909 481 ntBASIC13.05□□□□□ -0.32
Vcam1P29533 Gm17073-201ENSMUST00000168069 556 ntBASIC13.05□□□□□ -0.32
Vcam1P29533 Gm20414-201ENSMUST00000172918 646 ntBASIC13.05□□□□□ -0.32
Vcam1P29533 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC13.05□□□□□ -0.32
Vcam1P29533 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC13.05□□□□□ -0.32
Vcam1P29533 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC13.05□□□□□ -0.32
Vcam1P29533 Gm19927-201ENSMUST00000185792 781 ntBASIC13.05□□□□□ -0.32
Vcam1P29533 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC13.05□□□□□ -0.32
Vcam1P29533 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vcam1P29533 Gm17889-201ENSMUST00000198410 598 ntBASIC13.05□□□□□ -0.32
Vcam1P29533 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vcam1P29533 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Vcam1P29533 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcam1P29533 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Vcam1P29533 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC13.05□□□□□ -0.32
Vcam1P29533 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Vcam1P29533 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcam1P29533 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcam1P29533 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcam1P29533 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcam1P29533 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcam1P29533 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vcam1P29533 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Vcam1P29533 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcam1P29533 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.05□□□□□ -0.32
Vcam1P29533 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vcam1P29533 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Vcam1P29533 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcam1P29533 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.04□□□□□ -0.32
Vcam1P29533 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcam1P29533 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcam1P29533 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Vcam1P29533 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Vcam1P29533 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.04□□□□□ -0.32
Vcam1P29533 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcam1P29533 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Vcam1P29533 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vcam1P29533 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcam1P29533 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vcam1P29533 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Vcam1P29533 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vcam1P29533 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Vcam1P29533 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcam1P29533 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcam1P29533 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vcam1P29533 Gm11354-201ENSMUST00000121974 422 ntBASIC13.04□□□□□ -0.32
Vcam1P29533 Gm17214-201ENSMUST00000164501 541 ntBASIC13.04□□□□□ -0.32
Vcam1P29533 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Vcam1P29533 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Vcam1P29533 Gm31274-201ENSMUST00000197356 229 ntBASIC13.04□□□□□ -0.32
Vcam1P29533 Gm42660-201ENSMUST00000197733 947 ntBASIC13.04□□□□□ -0.32
Vcam1P29533 Gm18204-201ENSMUST00000209835 793 ntBASIC13.04□□□□□ -0.32
Vcam1P29533 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC13.04□□□□□ -0.32
Vcam1P29533 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcam1P29533 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcam1P29533 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcam1P29533 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcam1P29533 Gm5739-201ENSMUST00000208601 1703 ntBASIC13.04□□□□□ -0.32
Vcam1P29533 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Vcam1P29533 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcam1P29533 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Vcam1P29533 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcam1P29533 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC13.04□□□□□ -0.32
Vcam1P29533 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcam1P29533 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Vcam1P29533 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vcam1P29533 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vcam1P29533 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vcam1P29533 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vcam1P29533 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vcam1P29533 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.03□□□□□ -0.32
Vcam1P29533 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vcam1P29533 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vcam1P29533 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vcam1P29533 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vcam1P29533 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Vcam1P29533 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vcam1P29533 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vcam1P29533 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vcam1P29533 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vcam1P29533 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vcam1P29533 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Vcam1P29533 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vcam1P29533 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Vcam1P29533 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vcam1P29533 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms