Protein–RNA interactions for Protein: P28867

Prkcd, Protein kinase C delta type, mousemouse

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcdP28867 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
PrkcdP28867 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
PrkcdP28867 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.27□□□□□ -0.61
PrkcdP28867 Gm5616-201ENSMUST00000165252 384 ntBASIC11.27□□□□□ -0.61
PrkcdP28867 Gm8741-201ENSMUST00000174736 384 ntBASIC11.27□□□□□ -0.61
PrkcdP28867 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
PrkcdP28867 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
PrkcdP28867 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.27□□□□□ -0.61
PrkcdP28867 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
PrkcdP28867 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.27□□□□□ -0.61
PrkcdP28867 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PrkcdP28867 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
PrkcdP28867 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
PrkcdP28867 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PrkcdP28867 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
PrkcdP28867 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC11.27□□□□□ -0.61
PrkcdP28867 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
PrkcdP28867 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.27□□□□□ -0.61
PrkcdP28867 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
PrkcdP28867 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PrkcdP28867 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
PrkcdP28867 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PrkcdP28867 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PrkcdP28867 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PrkcdP28867 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PrkcdP28867 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkcdP28867 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PrkcdP28867 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PrkcdP28867 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkcdP28867 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PrkcdP28867 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkcdP28867 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkcdP28867 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PrkcdP28867 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkcdP28867 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PrkcdP28867 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkcdP28867 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkcdP28867 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkcdP28867 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkcdP28867 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
PrkcdP28867 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
PrkcdP28867 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
PrkcdP28867 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PrkcdP28867 Gm13296-201ENSMUST00000117854 997 ntBASIC11.26□□□□□ -0.61
PrkcdP28867 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.26□□□□□ -0.61
PrkcdP28867 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
PrkcdP28867 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PrkcdP28867 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PrkcdP28867 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.26□□□□□ -0.61
PrkcdP28867 Gm4857-201ENSMUST00000192718 785 ntBASIC11.26□□□□□ -0.61
PrkcdP28867 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.26□□□□□ -0.61
PrkcdP28867 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.26□□□□□ -0.61
PrkcdP28867 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.26□□□□□ -0.61
PrkcdP28867 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkcdP28867 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkcdP28867 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkcdP28867 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
PrkcdP28867 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PrkcdP28867 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkcdP28867 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PrkcdP28867 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkcdP28867 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkcdP28867 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkcdP28867 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkcdP28867 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
PrkcdP28867 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkcdP28867 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkcdP28867 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PrkcdP28867 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
PrkcdP28867 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
PrkcdP28867 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
PrkcdP28867 Gm37031-201ENSMUST00000195487 2530 ntBASIC11.26□□□□□ -0.61
PrkcdP28867 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PrkcdP28867 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PrkcdP28867 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.25□□□□□ -0.61
PrkcdP28867 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11.25□□□□□ -0.61
PrkcdP28867 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PrkcdP28867 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
PrkcdP28867 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC11.25□□□□□ -0.61
PrkcdP28867 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PrkcdP28867 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
PrkcdP28867 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PrkcdP28867 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.25□□□□□ -0.61
PrkcdP28867 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.25□□□□□ -0.61
PrkcdP28867 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PrkcdP28867 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.25□□□□□ -0.61
PrkcdP28867 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.25□□□□□ -0.61
PrkcdP28867 Gm37597-201ENSMUST00000191853 382 ntBASIC11.25□□□□□ -0.61
PrkcdP28867 Gm45224-201ENSMUST00000208203 414 ntBASIC11.25□□□□□ -0.61
PrkcdP28867 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
PrkcdP28867 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.25□□□□□ -0.61
PrkcdP28867 Gm6722-201ENSMUST00000221586 390 ntBASIC11.25□□□□□ -0.61
PrkcdP28867 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PrkcdP28867 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PrkcdP28867 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
PrkcdP28867 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PrkcdP28867 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PrkcdP28867 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
PrkcdP28867 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PrkcdP28867 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms