Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Gm38017-201ENSMUST00000194768 695 ntBASIC11.45□□□□□ -0.58
RxrbP28704 Gm37287-201ENSMUST00000195449 695 ntBASIC11.45□□□□□ -0.58
RxrbP28704 Gm37793-201ENSMUST00000195548 695 ntBASIC11.45□□□□□ -0.58
RxrbP28704 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
RxrbP28704 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.45□□□□□ -0.58
RxrbP28704 Gm4607-201ENSMUST00000206649 577 ntBASIC11.45□□□□□ -0.58
RxrbP28704 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.45□□□□□ -0.58
RxrbP28704 Gm6991-201ENSMUST00000218475 1178 ntBASIC11.45□□□□□ -0.58
RxrbP28704 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RxrbP28704 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RxrbP28704 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RxrbP28704 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RxrbP28704 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RxrbP28704 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RxrbP28704 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
RxrbP28704 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
RxrbP28704 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
RxrbP28704 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
RxrbP28704 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
RxrbP28704 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RxrbP28704 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RxrbP28704 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RxrbP28704 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RxrbP28704 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RxrbP28704 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
RxrbP28704 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
RxrbP28704 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
RxrbP28704 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.44□□□□□ -0.58
RxrbP28704 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
RxrbP28704 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.44□□□□□ -0.58
RxrbP28704 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RxrbP28704 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
RxrbP28704 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RxrbP28704 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RxrbP28704 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC11.44□□□□□ -0.58
RxrbP28704 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
RxrbP28704 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.44□□□□□ -0.58
RxrbP28704 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.44□□□□□ -0.58
RxrbP28704 Gm11660-201ENSMUST00000120955 412 ntBASIC11.44□□□□□ -0.58
RxrbP28704 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RxrbP28704 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RxrbP28704 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.44□□□□□ -0.58
RxrbP28704 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.44□□□□□ -0.58
RxrbP28704 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RxrbP28704 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RxrbP28704 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RxrbP28704 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.44□□□□□ -0.58
RxrbP28704 Mir7085-201ENSMUST00000184353 66 ntBASIC11.44□□□□□ -0.58
RxrbP28704 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RxrbP28704 Gm8885-201ENSMUST00000189382 598 ntBASIC11.44□□□□□ -0.58
RxrbP28704 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.44□□□□□ -0.58
RxrbP28704 Gm32999-201ENSMUST00000192693 562 ntBASIC11.44□□□□□ -0.58
RxrbP28704 Gm6621-201ENSMUST00000193251 772 ntBASIC11.44□□□□□ -0.58
RxrbP28704 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.44□□□□□ -0.58
RxrbP28704 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
RxrbP28704 Gm6450-201ENSMUST00000200896 574 ntBASIC11.44□□□□□ -0.58
RxrbP28704 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.44□□□□□ -0.58
RxrbP28704 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RxrbP28704 Gm45598-202ENSMUST00000210719 986 ntBASIC11.44□□□□□ -0.58
RxrbP28704 Gm2553-201ENSMUST00000215986 605 ntBASIC11.44□□□□□ -0.58
RxrbP28704 Gm7399-201ENSMUST00000032395 858 ntBASIC11.44□□□□□ -0.58
RxrbP28704 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
RxrbP28704 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RxrbP28704 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RxrbP28704 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
RxrbP28704 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
RxrbP28704 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RxrbP28704 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
RxrbP28704 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RxrbP28704 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RxrbP28704 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
RxrbP28704 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
RxrbP28704 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
RxrbP28704 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RxrbP28704 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
RxrbP28704 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
RxrbP28704 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RxrbP28704 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.43□□□□□ -0.58
RxrbP28704 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RxrbP28704 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
RxrbP28704 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RxrbP28704 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
RxrbP28704 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
RxrbP28704 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.43□□□□□ -0.58
RxrbP28704 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
RxrbP28704 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RxrbP28704 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.43□□□□□ -0.58
RxrbP28704 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.43□□□□□ -0.58
RxrbP28704 Gm2991-201ENSMUST00000173338 480 ntBASIC11.43□□□□□ -0.58
RxrbP28704 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
RxrbP28704 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
RxrbP28704 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.43□□□□□ -0.58
RxrbP28704 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.43□□□□□ -0.58
RxrbP28704 Gm7430-201ENSMUST00000193824 1144 ntBASIC11.43□□□□□ -0.58
RxrbP28704 Gm38321-201ENSMUST00000195053 235 ntBASIC11.43□□□□□ -0.58
RxrbP28704 Rprl1-202ENSMUST00000198476 238 ntBASIC11.43□□□□□ -0.58
RxrbP28704 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.43□□□□□ -0.58
RxrbP28704 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.43□□□□□ -0.58
RxrbP28704 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.43□□□□□ -0.58
RxrbP28704 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms