Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Gm37597-201ENSMUST00000191853 382 ntBASIC11.5□□□□□ -0.57
VimP20152 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VimP20152 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.5□□□□□ -0.57
VimP20152 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.5□□□□□ -0.57
VimP20152 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.5□□□□□ -0.57
VimP20152 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VimP20152 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.5□□□□□ -0.57
VimP20152 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
VimP20152 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
VimP20152 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VimP20152 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VimP20152 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VimP20152 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
VimP20152 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC11.5□□□□□ -0.57
VimP20152 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VimP20152 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VimP20152 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
VimP20152 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VimP20152 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VimP20152 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.49□□□□□ -0.57
VimP20152 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VimP20152 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
VimP20152 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.49□□□□□ -0.57
VimP20152 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VimP20152 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VimP20152 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
VimP20152 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
VimP20152 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
VimP20152 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
VimP20152 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
VimP20152 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
VimP20152 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.49□□□□□ -0.57
VimP20152 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.49□□□□□ -0.57
VimP20152 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
VimP20152 Gm8652-201ENSMUST00000181363 964 ntBASIC11.49□□□□□ -0.57
VimP20152 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VimP20152 Gm44872-201ENSMUST00000207864 420 ntBASIC11.49□□□□□ -0.57
VimP20152 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VimP20152 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.49□□□□□ -0.57
VimP20152 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.49□□□□□ -0.57
VimP20152 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.49□□□□□ -0.57
VimP20152 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VimP20152 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
VimP20152 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
VimP20152 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VimP20152 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.49□□□□□ -0.57
VimP20152 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
VimP20152 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VimP20152 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VimP20152 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.49□□□□□ -0.57
VimP20152 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
VimP20152 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
VimP20152 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
VimP20152 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VimP20152 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.49□□□□□ -0.57
VimP20152 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
VimP20152 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
VimP20152 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
VimP20152 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VimP20152 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VimP20152 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
VimP20152 Gm44103-201ENSMUST00000204364 3662 ntBASIC11.48□□□□□ -0.57
VimP20152 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
VimP20152 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
VimP20152 Gm38357-201ENSMUST00000195382 2464 ntBASIC11.48□□□□□ -0.57
VimP20152 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VimP20152 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VimP20152 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VimP20152 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VimP20152 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
VimP20152 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.48□□□□□ -0.57
VimP20152 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
VimP20152 Gm24644-201ENSMUST00000157114 139 ntBASIC11.48□□□□□ -0.57
VimP20152 Gm3329-201ENSMUST00000159873 556 ntBASIC11.48□□□□□ -0.57
VimP20152 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.48□□□□□ -0.57
VimP20152 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VimP20152 Gm5370-201ENSMUST00000187187 574 ntBASIC11.48□□□□□ -0.57
VimP20152 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.48□□□□□ -0.57
VimP20152 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VimP20152 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.48□□□□□ -0.57
VimP20152 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.48□□□□□ -0.57
VimP20152 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VimP20152 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
VimP20152 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.48□□□□□ -0.57
VimP20152 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VimP20152 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VimP20152 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VimP20152 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
VimP20152 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
VimP20152 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.48□□□□□ -0.57
VimP20152 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
VimP20152 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VimP20152 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.48□□□□□ -0.57
VimP20152 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
VimP20152 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
VimP20152 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
VimP20152 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VimP20152 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
VimP20152 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
VimP20152 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms