Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sdc1P18828 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sdc1P18828 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Sdc1P18828 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Sdc1P18828 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Sdc1P18828 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Sdc1P18828 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC9.26□□□□□ -0.93
Sdc1P18828 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC9.26□□□□□ -0.93
Sdc1P18828 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sdc1P18828 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Sdc1P18828 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sdc1P18828 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sdc1P18828 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Sdc1P18828 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC9.26□□□□□ -0.93
Sdc1P18828 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Sdc1P18828 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sdc1P18828 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Sdc1P18828 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC9.26□□□□□ -0.93
Sdc1P18828 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Sdc1P18828 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sdc1P18828 Gm11500-201ENSMUST00000118237 601 ntBASIC9.26□□□□□ -0.93
Sdc1P18828 Gm9431-201ENSMUST00000119765 1051 ntBASIC9.26□□□□□ -0.93
Sdc1P18828 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC9.26□□□□□ -0.93
Sdc1P18828 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Sdc1P18828 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC9.26□□□□□ -0.93
Sdc1P18828 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC9.26□□□□□ -0.93
Sdc1P18828 Gm7029-201ENSMUST00000173226 450 ntBASIC9.26□□□□□ -0.93
Sdc1P18828 Gm37201-201ENSMUST00000191845 523 ntBASIC9.26□□□□□ -0.93
Sdc1P18828 Gm37171-201ENSMUST00000192636 1185 ntBASIC9.26□□□□□ -0.93
Sdc1P18828 Gm37917-201ENSMUST00000194711 392 ntBASIC9.26□□□□□ -0.93
Sdc1P18828 Gm43514-201ENSMUST00000198852 424 ntBASIC9.26□□□□□ -0.93
Sdc1P18828 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC9.26□□□□□ -0.93
Sdc1P18828 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC9.26□□□□□ -0.93
Sdc1P18828 Gm6218-201ENSMUST00000219812 628 ntBASIC9.26□□□□□ -0.93
Sdc1P18828 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sdc1P18828 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Sdc1P18828 Gm9996-201ENSMUST00000070359 913 ntBASIC9.26□□□□□ -0.93
Sdc1P18828 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sdc1P18828 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sdc1P18828 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sdc1P18828 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sdc1P18828 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Sdc1P18828 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sdc1P18828 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sdc1P18828 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC9.26□□□□□ -0.93
Sdc1P18828 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Sdc1P18828 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sdc1P18828 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Sdc1P18828 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sdc1P18828 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sdc1P18828 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Sdc1P18828 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sdc1P18828 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sdc1P18828 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC9.26□□□□□ -0.93
Sdc1P18828 AC121870.2-201ENSMUST00000214343 1870 ntBASIC9.25□□□□□ -0.93
Sdc1P18828 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC9.25□□□□□ -0.93
Sdc1P18828 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Sdc1P18828 Gm21817-201ENSMUST00000178584 2583 ntBASIC9.25□□□□□ -0.93
Sdc1P18828 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 AC122367.1-201ENSMUST00000221978 1709 ntBASIC9.25□□□□□ -0.93
Sdc1P18828 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Sdc1P18828 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 Gm7357-201ENSMUST00000195361 2991 ntBASIC9.25□□□□□ -0.93
Sdc1P18828 AC108416.1-201ENSMUST00000228755 1558 ntBASIC9.25□□□□□ -0.93
Sdc1P18828 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Sdc1P18828 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Sdc1P18828 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC9.25□□□□□ -0.93
Sdc1P18828 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC9.25□□□□□ -0.93
Sdc1P18828 Gm7722-201ENSMUST00000120646 741 ntBASIC9.25□□□□□ -0.93
Sdc1P18828 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC9.25□□□□□ -0.93
Sdc1P18828 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC9.25□□□□□ -0.93
Sdc1P18828 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC9.25□□□□□ -0.93
Sdc1P18828 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC9.25□□□□□ -0.93
Sdc1P18828 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC9.25□□□□□ -0.93
Sdc1P18828 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC9.25□□□□□ -0.93
Sdc1P18828 Gm2213-201ENSMUST00000197485 688 ntBASIC9.25□□□□□ -0.93
Sdc1P18828 Gm19287-201ENSMUST00000203190 358 ntBASIC9.25□□□□□ -0.93
Sdc1P18828 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
Sdc1P18828 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sdc1P18828 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms