Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rb1P13405 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rb1P13405 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rb1P13405 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rb1P13405 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Rb1P13405 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rb1P13405 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rb1P13405 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rb1P13405 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Rb1P13405 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rb1P13405 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Rb1P13405 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rb1P13405 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rb1P13405 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rb1P13405 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rb1P13405 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rb1P13405 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.78□□□□□ -0.52
Rb1P13405 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rb1P13405 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rb1P13405 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rb1P13405 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rb1P13405 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rb1P13405 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rb1P13405 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.78□□□□□ -0.52
Rb1P13405 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rb1P13405 Gm15595-201ENSMUST00000120840 961 ntBASIC11.78□□□□□ -0.52
Rb1P13405 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.78□□□□□ -0.52
Rb1P13405 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC11.78□□□□□ -0.52
Rb1P13405 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rb1P13405 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rb1P13405 Gm29499-201ENSMUST00000189151 486 ntBASIC11.78□□□□□ -0.52
Rb1P13405 Gm28329-201ENSMUST00000191208 689 ntBASIC11.78□□□□□ -0.52
Rb1P13405 Gm29171-201ENSMUST00000191397 486 ntBASIC11.78□□□□□ -0.52
Rb1P13405 Gm37905-201ENSMUST00000195310 341 ntBASIC11.78□□□□□ -0.52
Rb1P13405 Gm45575-201ENSMUST00000210283 548 ntBASIC11.78□□□□□ -0.52
Rb1P13405 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.78□□□□□ -0.52
Rb1P13405 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.78□□□□□ -0.52
Rb1P13405 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rb1P13405 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.78□□□□□ -0.52
Rb1P13405 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Rb1P13405 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.78□□□□□ -0.52
Rb1P13405 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rb1P13405 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rb1P13405 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rb1P13405 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rb1P13405 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rb1P13405 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rb1P13405 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.78□□□□□ -0.52
Rb1P13405 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rb1P13405 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Rb1P13405 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Rb1P13405 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rb1P13405 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Rb1P13405 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Rb1P13405 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rb1P13405 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Rb1P13405 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Rb1P13405 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rb1P13405 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Rb1P13405 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rb1P13405 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Rb1P13405 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rb1P13405 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rb1P13405 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rb1P13405 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Rb1P13405 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rb1P13405 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Rb1P13405 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.77□□□□□ -0.53
Rb1P13405 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rb1P13405 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rb1P13405 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rb1P13405 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rb1P13405 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rb1P13405 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.77□□□□□ -0.53
Rb1P13405 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.77□□□□□ -0.53
Rb1P13405 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rb1P13405 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.77□□□□□ -0.53
Rb1P13405 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rb1P13405 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rb1P13405 Gm3028-201ENSMUST00000213805 1119 ntBASIC11.77□□□□□ -0.53
Rb1P13405 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.77□□□□□ -0.53
Rb1P13405 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rb1P13405 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.77□□□□□ -0.53
Rb1P13405 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rb1P13405 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rb1P13405 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rb1P13405 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rb1P13405 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rb1P13405 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rb1P13405 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rb1P13405 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rb1P13405 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Rb1P13405 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rb1P13405 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Rb1P13405 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Rb1P13405 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rb1P13405 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rb1P13405 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rb1P13405 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rb1P13405 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms