Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc6P10629 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc6P10629 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc6P10629 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Hoxc6P10629 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc6P10629 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc6P10629 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc6P10629 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc6P10629 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc6P10629 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc6P10629 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Hoxc6P10629 Gm22937-201ENSMUST00000103954 131 ntBASIC12.63□□□□□ -0.39
Hoxc6P10629 Gm23745-201ENSMUST00000104230 125 ntBASIC12.63□□□□□ -0.39
Hoxc6P10629 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
Hoxc6P10629 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc6P10629 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC12.63□□□□□ -0.39
Hoxc6P10629 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC12.63□□□□□ -0.39
Hoxc6P10629 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Hoxc6P10629 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Hoxc6P10629 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC12.63□□□□□ -0.39
Hoxc6P10629 Gm31274-201ENSMUST00000197356 229 ntBASIC12.63□□□□□ -0.39
Hoxc6P10629 Gm43752-201ENSMUST00000198475 697 ntBASIC12.63□□□□□ -0.39
Hoxc6P10629 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC12.63□□□□□ -0.39
Hoxc6P10629 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC12.63□□□□□ -0.39
Hoxc6P10629 AC122024.3-201ENSMUST00000217719 294 ntBASIC12.63□□□□□ -0.39
Hoxc6P10629 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC12.63□□□□□ -0.39
Hoxc6P10629 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc6P10629 Gm14005-208ENSMUST00000223654 681 ntBASIC12.63□□□□□ -0.39
Hoxc6P10629 CT010480.2-201ENSMUST00000225424 737 ntBASIC12.63□□□□□ -0.39
Hoxc6P10629 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc6P10629 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc6P10629 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Hoxc6P10629 Gm5449-201ENSMUST00000081132 357 ntBASIC12.63□□□□□ -0.39
Hoxc6P10629 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc6P10629 Gm7589-201ENSMUST00000085631 534 ntBASIC12.63□□□□□ -0.39
Hoxc6P10629 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Hoxc6P10629 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc6P10629 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Hoxc6P10629 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Hoxc6P10629 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc6P10629 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc6P10629 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc6P10629 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc6P10629 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc6P10629 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc6P10629 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc6P10629 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc6P10629 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc6P10629 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc6P10629 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc6P10629 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc6P10629 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc6P10629 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc6P10629 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Hoxc6P10629 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.62□□□□□ -0.39
Hoxc6P10629 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc6P10629 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc6P10629 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc6P10629 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc6P10629 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc6P10629 Gm3828-201ENSMUST00000121817 257 ntBASIC12.62□□□□□ -0.39
Hoxc6P10629 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc6P10629 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc6P10629 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC12.62□□□□□ -0.39
Hoxc6P10629 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC12.62□□□□□ -0.39
Hoxc6P10629 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC12.62□□□□□ -0.39
Hoxc6P10629 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc6P10629 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC12.62□□□□□ -0.39
Hoxc6P10629 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC12.62□□□□□ -0.39
Hoxc6P10629 Gm43547-201ENSMUST00000197729 328 ntBASIC12.62□□□□□ -0.39
Hoxc6P10629 Gm7939-201ENSMUST00000201233 1050 ntBASIC12.62□□□□□ -0.39
Hoxc6P10629 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc6P10629 BC080696-201ENSMUST00000202858 1218 ntBASIC12.62□□□□□ -0.39
Hoxc6P10629 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.62□□□□□ -0.39
Hoxc6P10629 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc6P10629 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Hoxc6P10629 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
Hoxc6P10629 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc6P10629 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc6P10629 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc6P10629 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc6P10629 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc6P10629 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Hoxc6P10629 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc6P10629 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc6P10629 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc6P10629 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc6P10629 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.62□□□□□ -0.39
Hoxc6P10629 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.62□□□□□ -0.39
Hoxc6P10629 Gm42499-201ENSMUST00000196193 1412 ntBASIC12.62□□□□□ -0.39
Hoxc6P10629 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc6P10629 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc6P10629 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Hoxc6P10629 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc6P10629 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Hoxc6P10629 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc6P10629 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc6P10629 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Hoxc6P10629 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc6P10629 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms