Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hoxc9P09633 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Hoxc9P09633 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
Hoxc9P09633 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hoxc9P09633 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC14.71□□□□□ -0.05
Hoxc9P09633 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hoxc9P09633 Gm44755-201ENSMUST00000207830 2102 ntBASIC14.71□□□□□ -0.05
Hoxc9P09633 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hoxc9P09633 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hoxc9P09633 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC14.71□□□□□ -0.05
Hoxc9P09633 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hoxc9P09633 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hoxc9P09633 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Hoxc9P09633 Gm11993-201ENSMUST00000121861 820 ntBASIC14.71□□□□□ -0.05
Hoxc9P09633 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hoxc9P09633 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Hoxc9P09633 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC14.71□□□□□ -0.05
Hoxc9P09633 Gm25226-201ENSMUST00000158198 123 ntBASIC14.71□□□□□ -0.05
Hoxc9P09633 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC14.71□□□□□ -0.05
Hoxc9P09633 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Hoxc9P09633 Gm37452-201ENSMUST00000194416 1160 ntBASIC14.71□□□□□ -0.05
Hoxc9P09633 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Hoxc9P09633 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC14.71□□□□□ -0.05
Hoxc9P09633 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Hoxc9P09633 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC14.71□□□□□ -0.05
Hoxc9P09633 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC14.71□□□□□ -0.05
Hoxc9P09633 AC134601.2-201ENSMUST00000221071 130 ntBASIC14.71□□□□□ -0.05
Hoxc9P09633 AC159196.1-201ENSMUST00000225524 377 ntBASIC14.71□□□□□ -0.05
Hoxc9P09633 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hoxc9P09633 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hoxc9P09633 Gm5449-201ENSMUST00000081132 357 ntBASIC14.71□□□□□ -0.05
Hoxc9P09633 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC14.71□□□□□ -0.05
Hoxc9P09633 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Hoxc9P09633 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Hoxc9P09633 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Hoxc9P09633 Erich3-203ENSMUST00000189969 3460 ntBASIC14.71□□□□□ -0.05
Hoxc9P09633 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Hoxc9P09633 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hoxc9P09633 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Hoxc9P09633 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Hoxc9P09633 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.71□□□□□ -0.06
Hoxc9P09633 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Hoxc9P09633 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Hoxc9P09633 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Hoxc9P09633 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Hoxc9P09633 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Hoxc9P09633 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Hoxc9P09633 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Hoxc9P09633 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Hoxc9P09633 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Hoxc9P09633 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hoxc9P09633 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hoxc9P09633 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Hoxc9P09633 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hoxc9P09633 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Hoxc9P09633 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Hoxc9P09633 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.7□□□□□ -0.06
Hoxc9P09633 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Hoxc9P09633 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Hoxc9P09633 Gm5739-201ENSMUST00000208601 1703 ntBASIC14.7□□□□□ -0.06
Hoxc9P09633 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hoxc9P09633 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Hoxc9P09633 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Hoxc9P09633 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hoxc9P09633 Gm11380-201ENSMUST00000118067 560 ntBASIC14.7□□□□□ -0.06
Hoxc9P09633 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Hoxc9P09633 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Hoxc9P09633 Gm12906-201ENSMUST00000154610 441 ntBASIC14.7□□□□□ -0.06
Hoxc9P09633 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Hoxc9P09633 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC14.7□□□□□ -0.06
Hoxc9P09633 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC14.7□□□□□ -0.06
Hoxc9P09633 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hoxc9P09633 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hoxc9P09633 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hoxc9P09633 Gm10254-201ENSMUST00000052888 867 ntBASIC14.7□□□□□ -0.06
Hoxc9P09633 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hoxc9P09633 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.7□□□□□ -0.06
Hoxc9P09633 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hoxc9P09633 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC14.7□□□□□ -0.06
Hoxc9P09633 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hoxc9P09633 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Hoxc9P09633 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Hoxc9P09633 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Hoxc9P09633 Gm11470-201ENSMUST00000118868 1475 ntBASIC14.69□□□□□ -0.06
Hoxc9P09633 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxc9P09633 Gm15519-201ENSMUST00000120088 1566 ntBASIC14.69□□□□□ -0.06
Hoxc9P09633 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxc9P09633 AC155245.1-201ENSMUST00000222266 1804 ntBASIC14.69□□□□□ -0.06
Hoxc9P09633 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxc9P09633 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Hoxc9P09633 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxc9P09633 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Hoxc9P09633 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxc9P09633 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Hoxc9P09633 Gm6831-202ENSMUST00000213025 1673 ntBASIC14.69□□□□□ -0.06
Hoxc9P09633 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxc9P09633 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Hoxc9P09633 Gm11475-201ENSMUST00000118482 476 ntBASIC14.69□□□□□ -0.06
Hoxc9P09633 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC14.69□□□□□ -0.06
Hoxc9P09633 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms