Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
NclP09405 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
NclP09405 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
NclP09405 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
NclP09405 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NclP09405 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NclP09405 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NclP09405 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NclP09405 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
NclP09405 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NclP09405 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC16.93■□□□□ 0.3
NclP09405 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NclP09405 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NclP09405 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NclP09405 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NclP09405 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NclP09405 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NclP09405 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NclP09405 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NclP09405 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NclP09405 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NclP09405 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
NclP09405 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC16.92■□□□□ 0.3
NclP09405 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC16.92■□□□□ 0.3
NclP09405 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC16.92■□□□□ 0.3
NclP09405 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NclP09405 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC16.92■□□□□ 0.3
NclP09405 Gm43380-201ENSMUST00000200421 220 ntBASIC16.92■□□□□ 0.3
NclP09405 Gm5298-201ENSMUST00000201122 892 ntBASIC16.92■□□□□ 0.3
NclP09405 Gm45410-201ENSMUST00000211331 1093 ntBASIC16.92■□□□□ 0.3
NclP09405 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC16.92■□□□□ 0.3
NclP09405 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC16.92■□□□□ 0.3
NclP09405 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
NclP09405 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NclP09405 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
NclP09405 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC16.92■□□□□ 0.3
NclP09405 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NclP09405 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NclP09405 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NclP09405 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NclP09405 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
NclP09405 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
NclP09405 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NclP09405 Gm3836-201ENSMUST00000211377 1613 ntBASIC16.92■□□□□ 0.3
NclP09405 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NclP09405 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NclP09405 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NclP09405 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NclP09405 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NclP09405 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NclP09405 AC165351.1-201ENSMUST00000219078 2020 ntBASIC16.91■□□□□ 0.3
NclP09405 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NclP09405 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NclP09405 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NclP09405 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
NclP09405 Gm12030-201ENSMUST00000121917 223 ntBASIC16.91■□□□□ 0.3
NclP09405 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NclP09405 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
NclP09405 Gm9116-201ENSMUST00000192400 1018 ntBASIC16.91■□□□□ 0.3
NclP09405 Gm8197-202ENSMUST00000193422 934 ntBASIC16.91■□□□□ 0.3
NclP09405 Gm3726-201ENSMUST00000203110 785 ntBASIC16.91■□□□□ 0.3
NclP09405 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC16.91■□□□□ 0.3
NclP09405 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
NclP09405 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
NclP09405 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
NclP09405 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NclP09405 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NclP09405 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
NclP09405 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
NclP09405 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NclP09405 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NclP09405 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NclP09405 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NclP09405 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NclP09405 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NclP09405 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NclP09405 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
NclP09405 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NclP09405 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NclP09405 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NclP09405 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
NclP09405 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC16.9■□□□□ 0.3
NclP09405 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NclP09405 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
NclP09405 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NclP09405 Gm3765-201ENSMUST00000130985 1447 ntBASIC16.9■□□□□ 0.3
NclP09405 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NclP09405 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NclP09405 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NclP09405 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NclP09405 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NclP09405 Gm25148-201ENSMUST00000104611 123 ntBASIC16.9■□□□□ 0.3
NclP09405 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NclP09405 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC16.9■□□□□ 0.3
NclP09405 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NclP09405 Gm25554-201ENSMUST00000158075 113 ntBASIC16.9■□□□□ 0.3
NclP09405 Gm3329-201ENSMUST00000159873 556 ntBASIC16.9■□□□□ 0.3
NclP09405 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC16.9■□□□□ 0.3
NclP09405 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NclP09405 Gm17798-201ENSMUST00000182282 1035 ntBASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms