Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf3O08791 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf3O08791 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ebf3O08791 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf3O08791 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf3O08791 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Ebf3O08791 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf3O08791 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf3O08791 BC043934-202ENSMUST00000185694 2356 ntBASIC11.89□□□□□ -0.51
Ebf3O08791 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf3O08791 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.89□□□□□ -0.51
Ebf3O08791 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ebf3O08791 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf3O08791 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ebf3O08791 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf3O08791 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ebf3O08791 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf3O08791 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ebf3O08791 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ebf3O08791 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf3O08791 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf3O08791 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Ebf3O08791 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.88□□□□□ -0.51
Ebf3O08791 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf3O08791 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Ebf3O08791 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.88□□□□□ -0.51
Ebf3O08791 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Ebf3O08791 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.88□□□□□ -0.51
Ebf3O08791 Gm3017-201ENSMUST00000203603 1126 ntBASIC11.88□□□□□ -0.51
Ebf3O08791 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.88□□□□□ -0.51
Ebf3O08791 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.88□□□□□ -0.51
Ebf3O08791 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf3O08791 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf3O08791 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf3O08791 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf3O08791 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf3O08791 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf3O08791 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf3O08791 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf3O08791 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf3O08791 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf3O08791 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf3O08791 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf3O08791 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf3O08791 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Ebf3O08791 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf3O08791 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.88□□□□□ -0.51
Ebf3O08791 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf3O08791 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.88□□□□□ -0.51
Ebf3O08791 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ebf3O08791 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf3O08791 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf3O08791 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf3O08791 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf3O08791 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf3O08791 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf3O08791 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf3O08791 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf3O08791 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf3O08791 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf3O08791 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf3O08791 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ebf3O08791 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ebf3O08791 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf3O08791 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf3O08791 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.87□□□□□ -0.51
Ebf3O08791 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf3O08791 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC11.87□□□□□ -0.51
Ebf3O08791 Gm10807-201ENSMUST00000177134 795 ntBASIC11.87□□□□□ -0.51
Ebf3O08791 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.87□□□□□ -0.51
Ebf3O08791 Gm37826-201ENSMUST00000195329 322 ntBASIC11.87□□□□□ -0.51
Ebf3O08791 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf3O08791 Gm7504-201ENSMUST00000201449 424 ntBASIC11.87□□□□□ -0.51
Ebf3O08791 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.87□□□□□ -0.51
Ebf3O08791 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf3O08791 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ebf3O08791 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf3O08791 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf3O08791 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf3O08791 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.87□□□□□ -0.51
Ebf3O08791 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf3O08791 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ebf3O08791 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Ebf3O08791 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf3O08791 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf3O08791 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Ebf3O08791 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf3O08791 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf3O08791 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ebf3O08791 Btrc-209ENSMUST00000224478 2194 ntBASIC11.86□□□□□ -0.51
Ebf3O08791 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf3O08791 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf3O08791 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf3O08791 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf3O08791 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ebf3O08791 Gm7278-201ENSMUST00000119836 1401 ntBASIC11.86□□□□□ -0.51
Ebf3O08791 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf3O08791 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.86□□□□□ -0.51
Ebf3O08791 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ebf3O08791 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms