Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Cpsf4lE9Q2N0 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Gm38055-201ENSMUST00000195353 2217 ntBASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Gm23272-201ENSMUST00000104053 129 ntBASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Gm12463-201ENSMUST00000118271 849 ntBASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Gm13326-201ENSMUST00000118730 1011 ntBASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Gm25492-201ENSMUST00000157383 129 ntBASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Gm8546-201ENSMUST00000178288 1264 ntBASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Gm21778-201ENSMUST00000178779 471 ntBASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Gm23694-201ENSMUST00000179335 110 ntBASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Gm35850-202ENSMUST00000211705 2120 ntBASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 AC160929.1-201ENSMUST00000221247 415 ntBASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Nsd1-205ENSMUST00000224693 852 ntBASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 AC122350.1-201ENSMUST00000228135 533 ntBASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 AC171241.1-201ENSMUST00000228144 1166 ntBASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Gm5451-201ENSMUST00000080545 579 ntBASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Gm5879-201ENSMUST00000089501 1209 ntBASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Gm13135-201ENSMUST00000117628 3121 ntBASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 AC153380.1-201ENSMUST00000214959 2364 ntBASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Cpsf4lE9Q2N0 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cpsf4lE9Q2N0 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cpsf4lE9Q2N0 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cpsf4lE9Q2N0 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cpsf4lE9Q2N0 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cpsf4lE9Q2N0 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cpsf4lE9Q2N0 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cpsf4lE9Q2N0 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cpsf4lE9Q2N0 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cpsf4lE9Q2N0 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cpsf4lE9Q2N0 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cpsf4lE9Q2N0 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC9.62□□□□□ -0.87
Cpsf4lE9Q2N0 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Cpsf4lE9Q2N0 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cpsf4lE9Q2N0 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cpsf4lE9Q2N0 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cpsf4lE9Q2N0 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Cpsf4lE9Q2N0 Gm25076-201ENSMUST00000104098 132 ntBASIC9.62□□□□□ -0.87
Cpsf4lE9Q2N0 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cpsf4lE9Q2N0 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cpsf4lE9Q2N0 Gm14585-201ENSMUST00000120713 634 ntBASIC9.62□□□□□ -0.87
Cpsf4lE9Q2N0 Gm15881-201ENSMUST00000148792 942 ntBASIC9.62□□□□□ -0.87
Cpsf4lE9Q2N0 Gm22846-201ENSMUST00000157706 270 ntBASIC9.62□□□□□ -0.87
Cpsf4lE9Q2N0 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Cpsf4lE9Q2N0 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Cpsf4lE9Q2N0 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC9.62□□□□□ -0.87
Cpsf4lE9Q2N0 Gm18753-201ENSMUST00000201000 566 ntBASIC9.62□□□□□ -0.87
Cpsf4lE9Q2N0 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC9.62□□□□□ -0.87
Cpsf4lE9Q2N0 Gm43916-201ENSMUST00000205062 967 ntBASIC9.62□□□□□ -0.87
Cpsf4lE9Q2N0 Gm9132-201ENSMUST00000210182 832 ntBASIC9.62□□□□□ -0.87
Cpsf4lE9Q2N0 AC166992.1-201ENSMUST00000216356 565 ntBASIC9.62□□□□□ -0.87
Cpsf4lE9Q2N0 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cpsf4lE9Q2N0 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms