Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scaf11E9PZM7 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scaf11E9PZM7 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scaf11E9PZM7 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scaf11E9PZM7 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scaf11E9PZM7 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Scaf11E9PZM7 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC15.73■□□□□ 0.11
Scaf11E9PZM7 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scaf11E9PZM7 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scaf11E9PZM7 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scaf11E9PZM7 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scaf11E9PZM7 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC15.72■□□□□ 0.11
Scaf11E9PZM7 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scaf11E9PZM7 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scaf11E9PZM7 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scaf11E9PZM7 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC15.72■□□□□ 0.11
Scaf11E9PZM7 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scaf11E9PZM7 Gm7805-201ENSMUST00000154348 448 ntBASIC15.72■□□□□ 0.11
Scaf11E9PZM7 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC15.72■□□□□ 0.11
Scaf11E9PZM7 Gm44420-201ENSMUST00000203669 490 ntBASIC15.72■□□□□ 0.11
Scaf11E9PZM7 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC15.72■□□□□ 0.11
Scaf11E9PZM7 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scaf11E9PZM7 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scaf11E9PZM7 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Scaf11E9PZM7 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scaf11E9PZM7 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scaf11E9PZM7 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scaf11E9PZM7 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scaf11E9PZM7 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Scaf11E9PZM7 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scaf11E9PZM7 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scaf11E9PZM7 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scaf11E9PZM7 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC15.72■□□□□ 0.11
Scaf11E9PZM7 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Scaf11E9PZM7 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scaf11E9PZM7 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scaf11E9PZM7 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scaf11E9PZM7 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Scaf11E9PZM7 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scaf11E9PZM7 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scaf11E9PZM7 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scaf11E9PZM7 Gm13505-201ENSMUST00000121666 817 ntBASIC15.71■□□□□ 0.11
Scaf11E9PZM7 Snord55-201ENSMUST00000174939 79 ntBASIC15.71■□□□□ 0.11
Scaf11E9PZM7 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC15.71■□□□□ 0.11
Scaf11E9PZM7 BB187690-201ENSMUST00000198619 1176 ntBASIC15.71■□□□□ 0.11
Scaf11E9PZM7 Gm7880-201ENSMUST00000203748 871 ntBASIC15.71■□□□□ 0.11
Scaf11E9PZM7 Gm44008-201ENSMUST00000204345 412 ntBASIC15.71■□□□□ 0.11
Scaf11E9PZM7 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC15.71■□□□□ 0.11
Scaf11E9PZM7 Gm44908-201ENSMUST00000208610 266 ntBASIC15.71■□□□□ 0.11
Scaf11E9PZM7 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scaf11E9PZM7 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC15.71■□□□□ 0.11
Scaf11E9PZM7 Gm3926-201ENSMUST00000223378 1123 ntBASIC15.71■□□□□ 0.11
Scaf11E9PZM7 AC159002.1-201ENSMUST00000226714 924 ntBASIC15.71■□□□□ 0.11
Scaf11E9PZM7 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Scaf11E9PZM7 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Scaf11E9PZM7 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Scaf11E9PZM7 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scaf11E9PZM7 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scaf11E9PZM7 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Scaf11E9PZM7 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC15.71■□□□□ 0.11
Scaf11E9PZM7 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Scaf11E9PZM7 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scaf11E9PZM7 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Scaf11E9PZM7 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Scaf11E9PZM7 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scaf11E9PZM7 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scaf11E9PZM7 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scaf11E9PZM7 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC15.71■□□□□ 0.11
Scaf11E9PZM7 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scaf11E9PZM7 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Scaf11E9PZM7 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC15.71■□□□□ 0.1
Scaf11E9PZM7 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Scaf11E9PZM7 Mir598-201ENSMUST00000102094 79 ntBASIC15.71■□□□□ 0.1
Scaf11E9PZM7 Gm5510-201ENSMUST00000117826 486 ntBASIC15.71■□□□□ 0.1
Scaf11E9PZM7 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Scaf11E9PZM7 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Scaf11E9PZM7 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Scaf11E9PZM7 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Scaf11E9PZM7 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Scaf11E9PZM7 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Scaf11E9PZM7 AC163638.2-201ENSMUST00000224920 827 ntBASIC15.71■□□□□ 0.1
Scaf11E9PZM7 AC133517.1-201ENSMUST00000225825 594 ntBASIC15.71■□□□□ 0.1
Scaf11E9PZM7 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Scaf11E9PZM7 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Scaf11E9PZM7 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Scaf11E9PZM7 Gm4778-201ENSMUST00000098878 1098 ntBASIC15.71■□□□□ 0.1
Scaf11E9PZM7 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Scaf11E9PZM7 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Scaf11E9PZM7 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Scaf11E9PZM7 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scaf11E9PZM7 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scaf11E9PZM7 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scaf11E9PZM7 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Scaf11E9PZM7 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scaf11E9PZM7 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scaf11E9PZM7 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scaf11E9PZM7 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scaf11E9PZM7 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Scaf11E9PZM7 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scaf11E9PZM7 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms