Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn7aB1AYL1 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn7aB1AYL1 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn7aB1AYL1 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn7aB1AYL1 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn7aB1AYL1 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn7aB1AYL1 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn7aB1AYL1 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn7aB1AYL1 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC14.38□□□□□ -0.11
Scn7aB1AYL1 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.38□□□□□ -0.11
Scn7aB1AYL1 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn7aB1AYL1 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC14.38□□□□□ -0.11
Scn7aB1AYL1 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC14.38□□□□□ -0.11
Scn7aB1AYL1 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn7aB1AYL1 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Scn7aB1AYL1 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.38□□□□□ -0.11
Scn7aB1AYL1 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn7aB1AYL1 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn7aB1AYL1 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn7aB1AYL1 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Scn7aB1AYL1 Gm5510-201ENSMUST00000117826 486 ntBASIC14.38□□□□□ -0.11
Scn7aB1AYL1 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC14.38□□□□□ -0.11
Scn7aB1AYL1 Gm11544-201ENSMUST00000120215 382 ntBASIC14.38□□□□□ -0.11
Scn7aB1AYL1 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC14.38□□□□□ -0.11
Scn7aB1AYL1 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC14.38□□□□□ -0.11
Scn7aB1AYL1 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn7aB1AYL1 Mir8111-201ENSMUST00000184463 137 ntBASIC14.38□□□□□ -0.11
Scn7aB1AYL1 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC14.38□□□□□ -0.11
Scn7aB1AYL1 Gm5254-201ENSMUST00000188353 977 ntBASIC14.38□□□□□ -0.11
Scn7aB1AYL1 Gm43811-201ENSMUST00000202862 695 ntBASIC14.38□□□□□ -0.11
Scn7aB1AYL1 Gm9644-201ENSMUST00000212828 1183 ntBASIC14.38□□□□□ -0.11
Scn7aB1AYL1 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC14.38□□□□□ -0.11
Scn7aB1AYL1 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Scn7aB1AYL1 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn7aB1AYL1 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Scn7aB1AYL1 Gm38344-201ENSMUST00000195306 1353 ntBASIC14.38□□□□□ -0.11
Scn7aB1AYL1 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scn7aB1AYL1 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Scn7aB1AYL1 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Scn7aB1AYL1 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn7aB1AYL1 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn7aB1AYL1 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn7aB1AYL1 Gm42833-201ENSMUST00000196019 2124 ntBASIC14.37□□□□□ -0.11
Scn7aB1AYL1 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn7aB1AYL1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Scn7aB1AYL1 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn7aB1AYL1 Gm24933-201ENSMUST00000103762 110 ntBASIC14.37□□□□□ -0.11
Scn7aB1AYL1 Gm23252-201ENSMUST00000103776 110 ntBASIC14.37□□□□□ -0.11
Scn7aB1AYL1 Mir291b-201ENSMUST00000104838 79 ntBASIC14.37□□□□□ -0.11
Scn7aB1AYL1 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn7aB1AYL1 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC14.37□□□□□ -0.11
Scn7aB1AYL1 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC14.37□□□□□ -0.11
Scn7aB1AYL1 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC14.37□□□□□ -0.11
Scn7aB1AYL1 Gm26443-201ENSMUST00000179610 110 ntBASIC14.37□□□□□ -0.11
Scn7aB1AYL1 Gm42710-201ENSMUST00000200608 985 ntBASIC14.37□□□□□ -0.11
Scn7aB1AYL1 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn7aB1AYL1 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC14.37□□□□□ -0.11
Scn7aB1AYL1 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scn7aB1AYL1 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn7aB1AYL1 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn7aB1AYL1 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Scn7aB1AYL1 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC14.37□□□□□ -0.11
Scn7aB1AYL1 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn7aB1AYL1 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn7aB1AYL1 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Scn7aB1AYL1 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scn7aB1AYL1 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn7aB1AYL1 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn7aB1AYL1 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn7aB1AYL1 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC14.36□□□□□ -0.11
Scn7aB1AYL1 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn7aB1AYL1 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC14.36□□□□□ -0.11
Scn7aB1AYL1 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC14.36□□□□□ -0.11
Scn7aB1AYL1 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC14.36□□□□□ -0.11
Scn7aB1AYL1 Gm9409-201ENSMUST00000197017 316 ntBASIC14.36□□□□□ -0.11
Scn7aB1AYL1 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn7aB1AYL1 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Scn7aB1AYL1 AC105408.1-201ENSMUST00000227771 802 ntBASIC14.36□□□□□ -0.11
Scn7aB1AYL1 AC161172.1-201ENSMUST00000227801 486 ntBASIC14.36□□□□□ -0.11
Scn7aB1AYL1 AC164883.7-201ENSMUST00000228534 851 ntBASIC14.36□□□□□ -0.11
Scn7aB1AYL1 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn7aB1AYL1 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn7aB1AYL1 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn7aB1AYL1 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn7aB1AYL1 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn7aB1AYL1 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn7aB1AYL1 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn7aB1AYL1 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn7aB1AYL1 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Scn7aB1AYL1 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn7aB1AYL1 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn7aB1AYL1 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn7aB1AYL1 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Scn7aB1AYL1 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn7aB1AYL1 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn7aB1AYL1 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn7aB1AYL1 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scn7aB1AYL1 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn7aB1AYL1 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Scn7aB1AYL1 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms