Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Sorbs3-204ENSMUST00000227929 2460 ntBASIC5.83□□□□□ -1.48
Ubr4A2AN08 Gm13623-201ENSMUST00000118359 625 ntBASIC5.83□□□□□ -1.48
Ubr4A2AN08 Gm12124-201ENSMUST00000120504 679 ntBASIC5.83□□□□□ -1.48
Ubr4A2AN08 Ntpcr-208ENSMUST00000152189 822 ntTSL 3 BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Gm30652-201ENSMUST00000199103 430 ntBASIC5.83□□□□□ -1.48
Ubr4A2AN08 Gm29977-201ENSMUST00000206804 724 ntBASIC5.83□□□□□ -1.48
Ubr4A2AN08 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Gm43225-201ENSMUST00000201381 1439 ntBASIC5.83□□□□□ -1.48
Ubr4A2AN08 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Gm8822-201ENSMUST00000118948 2347 ntBASIC5.83□□□□□ -1.48
Ubr4A2AN08 Ptprm-203ENSMUST00000224091 3773 ntBASIC5.83□□□□□ -1.48
Ubr4A2AN08 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Cenpk-202ENSMUST00000070761 1306 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ubr4A2AN08 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Timp1-202ENSMUST00000115342 883 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC5.82□□□□□ -1.48
Ubr4A2AN08 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC5.82□□□□□ -1.48
Ubr4A2AN08 1700019N19Rik-202ENSMUST00000166692 983 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Ubr4A2AN08 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Gm4275-203ENSMUST00000210214 1298 ntTSL 5 BASIC5.82□□□□□ -1.48
Ubr4A2AN08 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Gm45871-204ENSMUST00000211710 2003 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Gm36595-201ENSMUST00000218830 2006 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 AC090962.2-201ENSMUST00000225064 1801 ntBASIC5.82□□□□□ -1.48
Ubr4A2AN08 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Gm14278-201ENSMUST00000117381 878 ntBASIC5.82□□□□□ -1.48
Ubr4A2AN08 Fank1-202ENSMUST00000121560 475 ntTSL 5 BASIC5.82□□□□□ -1.48
Ubr4A2AN08 F730035M05Rik-201ENSMUST00000145871 1296 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Gm17228-201ENSMUST00000165006 491 ntBASIC5.82□□□□□ -1.48
Ubr4A2AN08 Gm7251-201ENSMUST00000182661 1009 ntBASIC5.82□□□□□ -1.48
Ubr4A2AN08 Ucma-205ENSMUST00000195688 554 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 AC162893.1-201ENSMUST00000207732 1085 ntBASIC5.82□□□□□ -1.48
Ubr4A2AN08 Gm19090-201ENSMUST00000218187 774 ntBASIC5.82□□□□□ -1.48
Ubr4A2AN08 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Bcl2-202ENSMUST00000189999 2841 ntBASIC5.82□□□□□ -1.48
Ubr4A2AN08 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Enpp3-203ENSMUST00000218044 1346 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
Ubr4A2AN08 AC160410.1-201ENSMUST00000219298 1972 ntBASIC5.82□□□□□ -1.48
Ubr4A2AN08 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Gm6517-201ENSMUST00000121056 511 ntBASIC5.82□□□□□ -1.48
Ubr4A2AN08 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Gm22994-201ENSMUST00000175422 82 ntBASIC5.82□□□□□ -1.48
Ubr4A2AN08 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 AC118704.1-201ENSMUST00000225022 695 ntBASIC5.82□□□□□ -1.48
Ubr4A2AN08 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Erich3-203ENSMUST00000189969 3460 ntBASIC5.82□□□□□ -1.48
Ubr4A2AN08 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Gm45088-201ENSMUST00000207066 1408 ntBASIC5.82□□□□□ -1.48
Ubr4A2AN08 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Gm20495-201ENSMUST00000173902 235 ntBASIC5.82□□□□□ -1.48
Ubr4A2AN08 Gm29372-201ENSMUST00000191416 364 ntBASIC5.82□□□□□ -1.48
Ubr4A2AN08 Rarres2-201ENSMUST00000009425 731 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ubr4A2AN08 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms