Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm14247-201ENSMUST00000120950 237 ntBASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm11660-201ENSMUST00000120955 412 ntBASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm4726-201ENSMUST00000135604 736 ntBASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm6019-201ENSMUST00000148369 736 ntBASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Mrpl40Q9Z2Q5 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm11956-201ENSMUST00000119525 512 ntBASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm15566-201ENSMUST00000121130 590 ntBASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm14460-201ENSMUST00000121511 639 ntBASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm15881-201ENSMUST00000148792 942 ntBASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm22144-201ENSMUST00000157402 102 ntBASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm8285-201ENSMUST00000208293 759 ntBASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm44551-201ENSMUST00000208804 171 ntBASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.5□□□□□ -0.57
Mrpl40Q9Z2Q5 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms